RetrogeneDB ID:
retro_csav_27
Organism:
Ciona savignyi ( Ciona_savignyi )
Location:
reftig_51:514272-515175 (-)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
61.26 %
Coverage:
96.49 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
CSA.10368
Parental gene aliases:
No gene alias available
Parental gene description:
Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:H2YP82]
Genomic region (view in browser)
>retro_csav_27
GATTTGGACAAAATGCTTGAAATTGCTAAACAGTGTAAATATCTTCCGGAATATGATTTA
AAGAAATTGTGCGATTATGTATGTGATCTACTGCTAGAGGAGTCAAATGTCCAACCTGTA
TCAACACCAGTTACAGTTTGCGGAGACATCCATGGTCAATTTTACGACCTACAAGAGCTT
TTCAAGACTGGAGGGGAAGTGCCTGACACAAACTACATTTTCATGGGCGATTTTGTGGAT
AGAGGATATTACAGTTTGGAAACATTGACATGTCTGCTAACATTAAAGGCTAAATGGCCA
AACAAGATCACATTATTGAGAGGAAATCACGAAAGTCGTCAAATCACACAGGTGTATGGG
TTTTATGATGAGTGCCAGACAAAGTATGGAAATGCCAATGCATGGAGATACTGTACTAAG
GTGTTCGACTTGCTAACAATTGCGGCAATAATAGATTCCACGATACTCTGTGTTCATGGT
GGCCTTTCGCCGGATGTAAAAACCCTGGATCAAATTCGCACCATAGACCGCCAGCAAGAG
ATCCCACATAAAGGAGCGTTTTGCGACCTCGTGTGGTCGGATCCAGAGGATGTAGACACA
TGGGCGATATCCCCTCGAGGGGCTGGTTGGTTATTTGGAGCTAAAGTAACCAACGAGTTT
GTCCATCTCAACAATCTTTCTCTTATCTGTCGGGCACATCAACTCGTACACGAAGGCTTC
AAGTACATGTTTGGTGAGAAACTGGTTACTGTATGGTCGGCTCCTAACTATTGCTACAGA
TGTGGAAATATTGCTGCAATTCTTGTGGTGCATACCAAAGAAGACAGAGAAGCAAAACTT
TTTCGTGCAGTTCCTGATAATTTGAGAGTTATTCCAGAGCGCAATACAACGCCGTACTTC
CTT
Parental protein coverage
Changes in the retrocopy sequence
