RetrogeneDB ID:
retro_dmel_18
Organism:
Drosophila melanogaster ( Drosophila_melanogaster )
Location:
2R:4588251-4589133 (-)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
55.63 %
Coverage:
61.73 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
Dd
Parental gene aliases:
No gene alias available
Parental gene description:
Dullard [Source:FlyBase gene name;Acc:FBgn0029067]

Genomic region (view in browser)





>retro_dmel_18
ATGGTCAGTCAGCTGCCCGCACAGTCTGCTGATTTAGACAAGCTCGCTCCATCAGGTCAG
TTTGCCGTCGCTGTGGTCAGCAATCTCCAGAGATCGCGTTCGAGCTCCGATCGCCGGGGG
CTCGTCTTGATCCTGCTCTCCAGCGACCTGGGCACCTACATCAGACGCCTGCTGGCCCGT
GTGGCGGAGAAGGCATGTACGATCCTACGTACATATCTGGGGCTTAGCTACCGGGAAGTG
TCCGTGTCCCAGGACATGGCCCACAGACTGGCCGTGGTTGGCCGGAAGACCCTGGTCCTG
GACCTGGATGAGACTCTGGTGCACTCATGTTACCTCGATCCGGACACCCACGACAACGTG
GGATGTAGCCAGTTGCCCGAACACGCACAACCGGACTATGTGCTCAATATTTCCATCGAC
GGGATGGAACCTATCGTTTTCCGGGTCTTCAAGCGGCCGCATGTAGACGAGTTCCTGGAC
TTTGTGTCCAAGTGGTACGACCTGGTGATCTATACGGCCAGCCTGGAGGTCTATGCCGCC
CAGGTTGTGGACCATCTGGACGCGGGGCGAGGATTGATTACTCGCCGCTTCTATCGCCAG
CACTGTCGAGCCTCCTCGCCAATGGTCTCCAAGGACCTGACATTGGTCACCCCTGACATG
AGCGGCGTTTTAATCATCGACAACTCGCCGTACGCATACCGCGACTTTCCCGACAACGCT
ATTCCCATTAAGACCTTCATCTACGACCCCGACGACACGGAGCTCCTGAAGATGCTGCCC
TTCCTCGATGCCCTGCGCTTCACCAAGGACGTTCGCTCCATTCTCGGTCGGCGCGTTATC
CGCCATTATTATAACCGATCTACCATTTCATCCCATCATTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
DFTVKVTID-RNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPG
D......ID...P..F.V.KRPHVD.FLD.VS.WYDLV..TAS.E.Y.A.V.D.LD.GR....RR.YRQHC........KDL.....D.....IIDNSP.
Retrocopy
DYVLNISIDGMEPIVFRVFKRPHVDEFLDFVSKWYDLVIYTASLEVYAAQVVDHLDAGRGLITRRFYRQHCRASSPMVSKDLTLVTPDMSGVLIIDNSPY


Parental protein
AYRCFPNNAIPIKSWFSDPMDTALLSLLPMLDALRFTNDVRSVLSRNLHLH
AYR.FP.NAIPIK....DP.DT.LL..LP.LDALRFT.DVRS.L.R....H
Retrocopy
AYRDFPDNAIPIKTFIYDPDDTELLKMLPFLDALRFTKDVRSILGRRVIRH


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide