RetrogeneDB ID:
retro_dmel_30
Organism:
Drosophila melanogaster ( Drosophila_melanogaster )
Location:
X:19425102-19425654 (-)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
50.33 %
Coverage:
74.15 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
CG7222
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_dmel_30
ATGTTCCTGAATGCCCTGCGAAGGATGCGCTGCCTGTGCGGCGACAGGGAGATCAGTACC
GAAGACATTGAACAGAGGGAGCCGGTAATGCTGAACATCTACGACCTGTCCACCAGCAAC
AACTACACTTTTCCGCTGGGCTTGGGTGTCTTCCATTCCGGCGTCCAGTTGTACGGGCGA
GAGTACGCATTTTTGGCGCTCAATCTCTCCATTTCCGGCATCTTTGAGATTCATCCCTGC
AATGGGCAGGAGGAGTTGGGCGAACACTTCCGTTTCCGGAAGAGCATTCTGCTCGGCTAC
ACCGACTTTACCTGCGCTGAAGTGAAGCGCGTTATCAACCTGCTGGGCTTCGAGTTCCGC
GGGACCAGCTACCACTTGACCAGCAAGAATTGCAACCACTTCTCCAACTGCCTGGCGCAT
CTCGTCTGTGGCCGTAAAATTCCGCGTTGGGTCAACCGCCTGGCCTACCTCATAACGTGT
GTCCCATTCCTCGAACGCTTTGTGGTCTCCAGTCCATCACATTACCCTCACTTCCGTCAA
TTTCAGCTCTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GNEELLPSNMGTREPVILNVYDMYWINEYTTSIGLGVFHSGVEAFGTEFAYGGHPFPFTGVFEISP-RDHDELGDQFQFRQSIQIGCTDFTYEEVRRIVE
G..E........REPV.LN.YD....N.YT...GLGVFHSGV...G.E.A.........G.FEI.P.....ELG..F.FR.SI..G.TDFT..EV.R...
Retrocopy
GDREISTEDIEQREPVMLNIYDLSTSNNYTFPLGLGVFHSGVQLYGREYAFLALNLSISGIFEIHPCNGQEELGEHFRFRKSILLGYTDFTCAEVKRVIN


Parental protein
ELGNQFRGDRYHLMNNNCNHFSGSLTQILCGQEIPSWVNRLAHFSSCVPFLQR
.LG..FRG..YHL...NCNHFS..L....CG..IP.WVNRLA....CVPFL.R
Retrocopy
LLGFEFRGTSYHLTSKNCNHFSNCLAHLVCGRKIPRWVNRLAYLITCVPFLER


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide