RetrogeneDB ID:
retro_dmel_53
Organism:
Drosophila melanogaster ( Drosophila_melanogaster )
Location:
X:5227437-5227950 (+)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.65 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
CanB2
Parental gene aliases:
No gene alias available
Parental gene description:
Calcineurin B2 [Source:FlyBase gene name;Acc:FBgn0015614]

Genomic region (view in browser)





>retro_dmel_53
ATGGGTAACGAGACCTCCCTGCCCATGGACATGTGTTCCAACTTCGATGCGGACGAGATC
CGTAGGCTGGGCAAGCGATTCCGCAAGCTGGATCTGGACAACTCGGGTGCGCTGAGCATA
GATGAGTTCATGTCGCTGCCGGAATTGCAGCAGAATCCGCTGGTGCAGCGGGTTATCGAT
ATCTTCGATGCGGATGGAAACGGGGAGGTGGACTTCAAGGAGTTTATCCAGGGAGTGTCG
CAGTTTAGCGTGCGCGGCGATAAGCTGTCCAAGCTGCGATTCGCCTTCCGCATCTATGAT
ATGGACAATGATGGCTACATCTCGAACGGGGAACTCTTCCAGGTGCTCAAGATGATGGTG
GGCAACAATCTGAAGGACACACAGCTGCAGCAGATCGTGGACAAGACCATTTGCTTTGCG
GACAAGGACGAGGATGGCAAGATATCGTTCGATGAATTCTGCTCGGTGGTGGGCAATACC
GATATTCACAAGAAAATGGTTGTCGATGTTTAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MGNETSLPMEMCSNFDADEIRRLGKRFRKLDLDNSGALSVDEFMSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYD
MGNETSLPM.MCSNFDADEIRRLGKRFRKLDLDNSGALS.DEFMSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSV.GDKLSKLRFAFRIYD
Retrocopy
MGNETSLPMDMCSNFDADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYD


Parental protein
MDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIGFADKDEDGKISFDEFCSVVGNTDIHKKMVVDV
MDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI.FADKDEDGKISFDEFCSVVGNTDIHKKMVVDV
Retrocopy
MDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTICFADKDEDGKISFDEFCSVVGNTDIHKKMVVDV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide