RetrogeneDB ID:
retro_ecab_1006
Organism:
Horse ( Equus_caballus )
Location:
9:30092624-30093623 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
97.6 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
G3PDH
Parental gene aliases:
GAPDH, G3PDH
Parental gene description:
glyceraldehyde-3-phosphate dehydrogenase [Source:RefSeq peptide;Acc:NP_001157328]
Genomic region (view in browser)
>retro_ecab_1006
ATGGTGAAGGTCGGAGTAAATGGATTTGGCCGTATTAGGCGCCTGGTCACCAGGGCTGCT
TTTAACTCTGGCAAAGTGGATATTGTCGCCATCAATGACCCCTTCATTGACCTCAACTAC
ATGGTCTACATGTTTCAGTATGATTTCACCCATGGCAAGTTCCATGGCACAGTCAAGGCC
GAGCACGGGAAGCTTGTCATCAACGGAAAGGCCATCACCATCTTCCAGGAGCGAGATCCC
GCCAACATCAAATGGGGCGATGCTGGTGCTGAATATGTTGTGGAGTCCACTGGTGTCTTC
ACTGCCTTGGAGAAGGCTGGGGCTCACTTGAAGGGTGGAGCCAAAAGGGTCATCATCTCT
GCCCCTTCTGCTGATGCCCCAATGTTTGTGATGGGCGTGAACCACGAGAAGTATGACAAT
TCCCTGAAGATTGTCAGCAATGCCTCCTGCACCACCAGTTGCTTGGCCCCCCTGGCCAAG
GTCATCCATGACCACTTTGGCATCGTGGAGGGACTCATGACTGCAGTGCATGCCATCACT
GCCACCCAGAAGACCGTGGATGGCCCCTCTGGGAAGCTGTGGCGCGATGGCCGAGGGGCT
GCCCAGAACATCATCCCTGCTTCTACTGGTGCTGCCAAGGCTGTGGGCAAGGTCATCCCT
GAACTGAATGGGAAGCTCACTGGCATGGCCTCCCGTGTCCCCACGCCTAATGTGTCAGTC
GTGGATCTGACCTGCCGCCTGGAGAAAGCTGCCAAATACGATGAGATCAAGAAGGTGGTG
AAGCAAGCATCAGAGGGCCCCCTCAAGGGCATCCTGGGCTACACTGAGGACCAGGTTGTC
TCCTGCGATTTTAACAGTGACACCCACTCTTCCACCTTCGATGCTGGGGCTGGCATTGCC
CTCAATGACCACTTTGTCAAGCTCATTTCCTGGTATGACAATGAATTTGGCTACAGCAAT
AAGGTGGTGGACCTTATGGCCCACATGGCCTCCAAGGAG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.12 |
| SRP021940_cerebellum | 0.25 |
| SRP021940_embryo | 0.17 |
| SRP021940_placental_villous | 0.09 |
| SRP021940_synovial_membrane | 0.13 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
