RetrogeneDB ID:
retro_ecab_1028
Organism:
Horse ( Equus_caballus )
Location:
9:56576223-56576831 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
75.49 %
Coverage:
58.43 %
Frameshifts:
1
Stop codons:
2
Parental gene:
Parental gene symbol:
MRPS31
Parental gene aliases:
No gene alias available
Parental gene description:
mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:16632]
Genomic region (view in browser)
>retro_ecab_1028
ACGACCAAGTCAGAGCTGCTCAGGCAGTTCCAGCAGCACTAGGAAGATTCAAAGACGCAG
AAAGATGGAGAAAGACGTAAAATTAGTTTTGGTAACATACTATCAGATATGAAAGTTGCC
GGATCTGCTACAGTTAGAGTTTGTGCAAGACCAGTGCATCAGATTTAGTTTAACAAAGGA
TCTGACAATGATCACAGCCAAGAGAAGACTGCTGATATTAGAAAACATCATAGGAAAAAT
ATACTCAAAGGGAAGAGACTCCATATTTTTGAGAGTAAGGCAGTTACTGAAGAAGCACCT
GAAACAGAGACATCACCTTCACTTGGGGTGTGGAATTCACTAAGCAGCTAGCCTCAGTAA
ATTCACAGCCCTTTCAAAATGGTTTTGAAGAGATGATCCAGTGGAGACATGAGGGGAAAC
TATGGGAGTTCCCAGTTAACAATGAAGCAGATTTTGATGAGGATGATTCAGGATTTCATG
AATATATATTTCTAGATAAATACTTGGAGAATTTTCCAAAGCAAGAACCAGTTCTCCACT
TCATGGAAATGGTGACCTGTGGTCTTTCCAAAAACCCATATCTGAGTGTTAAACAGAAAG
TCAATCAC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
