RetrogeneDB ID:
retro_ecab_1055
Organism:
Horse ( Equus_caballus )
Location:
X:24200046-24200784 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
74.31 %
Coverage:
98.81 %
Frameshifts:
3
Stop codons:
2
Parental gene:
Parental gene symbol:
TRPT1
Parental gene aliases:
No gene alias available
Parental gene description:
tRNA phosphotransferase 1 [Source:HGNC Symbol;Acc:20316]
Genomic region (view in browser)
>retro_ecab_1055
ATGAACTCCTCTGGCGGAAGGAGGCAGGAAGCAGCAGGGCCTGGGGGCAGAAGTACTCAC
AGATCCCAAGAATCAGATGTGCAACTGTCCAAGGCTCTGCCCTGCGCCCTGTGCCACGGG
GCCCTGAAGCTGAGGTTTCCCACGGGGGCCAACAGCTTTGTGCCCCTGGGCGCCCTCCTG
CAGCTCCCCAGTTCCGAAGCATCTCAGCTAAAGGTGTGCACTGTGTGGTGGACACCAAAG
GGAAGCAGCGCTTTGCCCTGCAGCTGGGGGACTCCAGCACTGGCCTTCTCATCCAGGCCA
ATCAGGGACACTCTCTGTAGGTACCTTAGTTGGAGTTGATGCCCCTGGGGACCCCACAGG
CCCTGCCCTGATGCTCATCCATGGCACATTCTGGCAGCACTGGCCATCCATCTTGCTCAA
GGGCCTGTCCTGCTGGGGAAGGATGCACATCCACCTGGCCCTAGGACTGCCTGGGGATCC
TGGTGTCAGTGGCATGTGGTCAAACTGCAGACGGGTCATGTTCATCAACAGGCCCCTGGC
CCTGGCAGATGGAGCCCTTTTCTTCAGCTCTGCCAATGAAGTGATTCTGACTCCAGGGAA
AGCTGATGGCTTCCTGCTTCCCAAGTACTTCAAGGAGGCCCTGCAGCTATGCCCTACCGA
AACCCTCTCTCCTTGGCTGATAATGAAAAGACAGAGTGTCAGAGTGGCCCTGAGCACAGC
TCCAGAGGAAGAAGGATA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
