RetrogeneDB ID:
retro_ecab_1061
Organism:
Horse ( Equus_caballus )
Location:
X:41972115-41973614 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
86.28 %
Coverage:
99.6 %
Frameshifts:
4
Stop codons:
3
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_1061
CCACCTAGGCCGTGCTGGCCCCCAGCCAGCAGCCCGAGGTCTTCTACAACCAGATCTTCA
TAAACAAGGAGTGGCATGACGCCATCAGCAAGAAAACATTCCCTACCGTCAATCCGTCCA
CTGGGGAGGTCATCTGTTGGGTAGCTACAGGTGACAAGGAAGATGTGGACAGGGCAGTGA
AGGCTGCCCGGGCCACCTTTCAGCTTGGCTTGCCCTGGCACTGCATGGATGCGTCCAACA
GGGGTCGGCTGCTAAACCACCTGGCCGATCTGATTGAGTGGGACCAGACCTACCTGGCAG
CCTTGGAGACCCTGGATAATGGCAAGCCGTACGTTATCTCTTACCTGGTGGATTTGGACA
TGGTCCTCAAATGTCTCCGTTATTATGCCAGCTGGGCCGAGTAGTACCATGGGAAAACCA
TTCTCATCGATGGGGACTTCTTCAGCTACACCCTGCATGAACCTGTGGGGGTGTGCAGGC
AGATCATTCCATGGAACTTCCCTCTCTTCATGCAAGCATGGAAACTGGGCCCAGGCCTTG
GCAACTGGAAACGTGGTTGTAATGAAGGTGGCTGAGCAGACTCCACTCACTGCCCTCTAT
GTGGCCAACTTGATTAAGGAGGCTGGCTTTCCCCCTGGTGTGGTCAATATTGTTCTTGGA
TTTGGCCCCATGGGTGGGGCTACCATTGCCTCCCATGAGGATGTGGACAAAGTGACTTTC
ACAGGCTCCACTGAGGTTAGCCACCTAATCTAGGTTGCTGTGGGGAGAGGTAACCTCAAG
AAAGTCACCCTGGAGCTTGGAGGGAAAAGCCCCAATATCCATAATGTCAGATGCTGATAT
GGACTGGGTGGTGGAGCAGACCCACTTTGCCCTGTTCTTCAGCCAGGGCCAGTGCTGCTG
TGGGGGCTCCCGGACCTTTGTGCAGGAGGATGTTTACACTGAGTTTGTGGAGCACAGCGT
TGCCCAGGCCCGGTCTCGGTCTGGTGTGGTCAGGAACCCCTTTGACAGCCAGACCAAGCA
GGGGCCACAGGTGGATGAAACTCAGTTTAAGAAGGTCCTGGGCAATATCAAATCTGGGAA
GGAAGAGGGGGGCGAAGCTGCTGTGTGGTGGAGGGACAGCTGCTGACCATGGCTACTTCA
TCCAGCCCACCGTGTTTGGAGATGTGCAAGATGGCATGATAGTCGCAAAGGAGCAGATCT
TTGGGCCAGTGATGCAGATCCTGAAGTTGAAGACCATAGAGGAAGTCGTTGGGAGAGCCA
ACAATTCCAAGTATAAGCTGGCCGTAGCTGTCTTCATGAAGGACTTGGACAAGGCCAAGT
ATCTGTCCCAAGCCCTCTAGGCTGGCACTGTGTGGATCAACTGCTATGACGTGTTTAGGG
CCCAGTCACTATTTGGTAGCTACAAGATGTCTGGGAATGGCCAGGAGCTGGGAGAGTATG
GCCTGCAGGCATATACCAAAGTGAGAACTGTCACAATCAGAGTTCCTCAGAAGAACTCA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.23 |
| SRP021940_cerebellum | 0.5 |
| SRP021940_embryo | 0.98 |
| SRP021940_placental_villous | 0.27 |
| SRP021940_synovial_membrane | 0.26 |
| SRP021940_testis | 0.18 |
Parental protein coverage
Changes in the retrocopy sequence
