RetrogeneDB ID:
retro_ecab_1072
Organism:
Horse ( Equus_caballus )
Location:
X:55514089-55514599 (+)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
77.06 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
CNBP
Parental gene aliases:
No gene alias available
Parental gene description:
CCHC-type zinc finger, nucleic acid binding protein [Source:HGNC Symbol;Acc:13164]
Genomic region (view in browser)
>retro_ecab_1072
ATGAGCAGTAAGGACTGCTTCAGGGGTGGACGCTCTGGCCACTGGGCCCGGGGATGCCCT
AGAGGAGGAGCTCGAGGGCGCGGAGCTAGAGGCCGTGGCAGAGGTTCTCAGGGCACTTCC
ACCACCCTACCTGACATCTGTTACCGCTGCGGTGAGTCTGGTCATCATGCTAGGGACTGT
CACCTTCTCGAGAACATCTGCTACAACTGTGGGAGAAGTGGCCACATTGCCAAAGACTGT
ACGGAGCCTAAGCGAGAGAGGGAGCAGTGCTGTTACACTTGTGGCAGACGAGGCCATCTG
GCTCGCGATTGTGACCGTCAGGAACAGCAAAAGTGTTACTCTTGCGGCGAATTAGGCCAC
TTTCAGAAAGACTGTACCCAAGTCAAGTGCTACCGGTGTGGCGAGACCGGCCACGTGGCC
ATCAACTGTAGCAAGAAGAACAAGGTCAATTGCTACCGCTGTGGCAAGCCCGGACATCTA
GCCCGGGAATGCCCCACTGAGGCTACCGCT
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.02 |
| SRP021940_placental_villous | 0.09 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 8.9 |
Parental protein coverage
Changes in the retrocopy sequence
