RetrogeneDB ID:
retro_ecab_1079
Organism:
Horse ( Equus_caballus )
Location:
X:69842614-69843400 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
71.21 %
Coverage:
70.4 %
Frameshifts:
0
Stop codons:
3
Parental gene:
Parental gene symbol:
SH3GLB2
Parental gene aliases:
No gene alias available
Parental gene description:
SH3-domain GRB2-like endophilin B2 [Source:HGNC Symbol;Acc:10834]
Genomic region (view in browser)
>retro_ecab_1079
GTGCCACTGTGGCCCAACCCCAGTGCCCGAGTGGAGGAGTTTCCATATGAGAAGCTAGAC
AGGAAGCTGACTTTGTGGGTCACCAATATGGAACTGCTGCATCAGTCCATGTCAGAGATG
GCCAGTGGGCTGGGCCCCACTGCTACCTAGGGGAAGACATTGATCAAGGTGGCAGAAACT
GAAAAGTGCCTGGGAGATACAGAAGATTTTATCCTCATAGCCCCCACCAACTTCCTCATG
TCCCAGTGCAACTTCCAAGAAGGGGGCTGGAAGATGATTTCCAAGGAGGGGTGGCTCCTC
CAAAACCTGTGTCTGGACTTGAATGCCTGCAAAGCACTCCTGAAGAAGGCCAAGGCTGCA
GAAGCCAAAGCCACAATGGTGCTTGAATTTCAGGAGACTTGACCTTGTAATTAAATTCTC
TCCAGCAGCGCCTCCCTGCTTTGGAATGATGAGGTGGACAAGACTGAGCAGGAGCTCCAA
GTAGCCCCAAAGGAGGTCGACCAGCAGGCAGAAGTGACCAGTCTCCTGCTGGAGGGAATC
AGCTGCATTCACATGAAGCATCTTCGTTGCCTCTGTGAGTTCCTAGAGTCTCAGACAACT
TATTACGTGCAGTGCTACTGCTGCATGCTGGACTTACATAAACAGCTGGACAGATTTCCA
GGCACCTTCATGGGTACAACAGAACCCACCTACCTGCCCCTGAGCAGCAAGTCACCCACC
ACCACAGCTACTGTGCCTGTGGTACCCTCTGTGGCTGGCCTGGCCTCTTTGGGGGAACCT
GCTCTG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
