RetrogeneDB ID:
retro_ecab_1091
Organism:
Horse ( Equus_caballus )
Location:
X:111508787-111509369 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
65.13 %
Coverage:
94.06 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
C16orf72
Parental gene aliases:
No gene alias available
Parental gene description:
chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:30103]
Genomic region (view in browser)
>retro_ecab_1091
ATGTGGGGACCCCTTCCCACGAAGTGCGGCATGGCCGTGACCAGCCTCTACAAAGAGAGC
GGGGATGCCCACCAGCGAAGTTTTGACCTGGGCGTCCAGGTGGGCTACCAGCGTCGCATC
AGAGACGTGCTGGAGTGGGTGAAGAAGGGCCGGAGCACCATTCTCCGTGAAGACCTGATT
AGCTTCCTGTGTGGCAAAGTGCCGCCCGTGCCGCCACCACGCTCCCCCAGGACGCCCTCG
AAGCCCCCCGCTGGGGCCACCAGCCAGGCCGCAGCCATCGAATCCAGCTCGTCGGTGGAG
GTCGACTTGCAGCCCTTCCATGAGGCCATCGCGCTGCATGGCCTCAGTGGCGCCATGGCC
AGCATCAGCGTGCGGTCGGGCACACCTGGCTCCCCACCTCAGGCCAGTGGCGGCGCCAGC
GGTGGGCGTCAAAAAAGTAATGGCCTTGAAGACGACTTGAAGCCCTTCGACCTGGAAGAA
CTGGCCCCCCATGCAGACAGTGGGGGGAACCGCAAGCGCACCTCGGCCCAGTGTGGGGAT
GGCATCTCAGACTCCCCAACCCACAAGCGCAACCGAATGGTC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.23 |
| SRP021940_cerebellum | 1.74 |
| SRP021940_embryo | 2.35 |
| SRP021940_placental_villous | 0.18 |
| SRP021940_synovial_membrane | 0.13 |
| SRP021940_testis | 2.55 |
Parental protein coverage
Changes in the retrocopy sequence
