RetrogeneDB ID:
retro_ecab_1115
Organism:
Horse ( Equus_caballus )
Location:
X:60753332-60753736 (-)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
97.06 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
1
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_1115
ATGGCTGCCCTCAGACCCCTCGTGAAGCCCAAGATCGTCAAAAAGAGGACCAAGAAGTTC
ATTCGGCACCAGTCAGACTGATATGTCAAAATTAAGCGTAACTGGCGGAAACCCAGAGGC
ATTGACAATAGGGTGCGCAGAAGATTCAAGGGCCAGATCTTGATGCCCAACATTGGTTAT
GGGAGCAATAAGAAAACGAAGCACATGCTGCCCAGTGGCTTCCGGAAGTTCCTGGTCCAC
AACGTCAAGGAGCTTGAAGTGCTGCTCATGTGCAACAAATCGTACTGTGCTGAGATTGCT
CACGACGTCTCCTCCAAGAACCGCAAAGCCATCGTGGAAAGAGCAGCCCAGCTGGCCATC
AGAATCACCAATCCCAATGCCAGCTGCGCAGCGAAGAAAACGAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.12 |
| SRP021940_cerebellum | 0.05 |
| SRP021940_embryo | 0.31 |
| SRP021940_placental_villous | 0.27 |
| SRP021940_synovial_membrane | 0.21 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
