RetrogeneDB ID:
retro_ecab_1118
Organism:
Horse ( Equus_caballus )
Location:
X:68937646-68938227 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
65.83 %
Coverage:
58.33 %
Frameshifts:
3
Stop codons:
3
Parental gene:
Parental gene symbol:
NT5C3A
Parental gene aliases:
NT5C3A, NT5C3
Parental gene description:
5'-nucleotidase, cytosolic IIIA [Source:HGNC Symbol;Acc:17820]
Genomic region (view in browser)
>retro_ecab_1118
CAAAGTTTAGTTCTCACCAAGAACCCTACAAGACTAGAAGAAAATCTCTGTGGTCTTATC
AAAGGAGGAGCTGCCAAATTTCAGATACTAACAGACTTTTATATGATACTATGTAGATTT
TCCTTAGGAAAAAGATGCTCAACATGACACAATATCATTGACAACTGTAAGCTGGTTACA
AATGAATGTCAAAAAATGTTACTGAAGCTAAATAAAAAAACATTATGCTATTAAAATTGA
TCTTAATCTAACTTTAGAAGGGAAGTACCCTTGTATGATAGAAGGGTATACTAAATCACA
TGATTTTCTTTTTGAAAAGACTTTACCAAAATCTAAGCTTAAAGAAATGACAGCAGAATC
TGACATTATGCTCAAAGAAAGATGTGAAATTTTCTTTGATAAGTTCTAAGAAAACAGTAT
CCCTATATTTATATTTTCAGCTGGTATTGGTGATATGTTATAGATGGTATCCATCAAGGT
GGTATTTATCATCCAGATGTCAAAGTAGCCTCAACTTCATGGATTTTTATGAAAATGGGA
TTCTCAAAGGATTTAAAGAACTATTTCATATAATTAACAAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
