RetrogeneDB ID:
retro_ecab_1124
Organism:
Horse ( Equus_caballus )
Location:
X:84088808-84089924 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
70.74 %
Coverage:
87.38 %
Frameshifts:
2
Stop codons:
2
Parental gene:
Parental gene symbol:
FBXL3
Parental gene aliases:
No gene alias available
Parental gene description:
F-box and leucine-rich repeat protein 3 [Source:HGNC Symbol;Acc:13599]
Genomic region (view in browser)
>retro_ecab_1124
GATCAGGCCCGCGCATCTTCTGTATGTAGGAGATGGAATGAAGTTTTTCATATCCCTGAC
CATTGGAGAAAGTTTGAATTTGAACTGAACCAATCAGCGACTTTGTCTTTTCAAGCCACT
CCTCGTGATCTCATTCAGCAGATCTTTAAAAGGCATGTTGCCTGTCTCCAGTATGTCAGC
TTTAAGGTTGATAGCAGTACTGAATCAGCAGAGGCTGCCTGTGATATACTTTCTCAGCTG
GGAAATGGTTCTCCACACCTTGGGCTTGATTTCTAGGGCCAATCCAAGTTTTATGAACGT
GTCAAAGTCTCATTTTGTGTCAGCACTTACACTTGCTTGTGTCAACTCAAAATCATTATC
ATCAATCAAACTTGAAGACCCACCAGTGGATGACCCTTCACTGAAGGTTCTGGTGGCCAA
TAATAGTGATACTCTAACACTCCTAAAAATGAGCAGCTGTCCTTATGTTTCATCTGATGG
AATCCTTTGTGTAGCCGATCATTGTCAAGGCCTTAGAGAACTGGCATTGAATTATTACAT
TCCAAGTGATGAACTTCTGGCCCTTTCAAGTGAGACTCATGTTAACCTTGAACATCTTCG
AATTGATGTTGTGAGTGAAAATCCTGGACAAATTAAATTTCATTCCATTAAAAAACAAAG
TTGAGATGCACTTATTAAACACTCCCCTGGAGTTAATGTTGTCATATGCTTCTTTTTAAA
CGAAGAGGAATTTGAGACATTCTTCACAGAAGAATCCCCTGTCACTCATCTTTATTTCTG
TCGGTCAGTAAGCAAAGCGGTCCTAGGACGGATAGGTCCTAACTGCCCACGCCTAGTTGA
GTTAGTGGTGTGTGCAAACGTTCTTCAGACTCTTGGTAATGAGCTGATCTGTATTGCTCA
ACACTGTAAAAACTGAACAGCCTTGGGCCTCAGTGCATGTGAAGTTCGCTGCAGTGCCGT
GGTTGAGTTTGTAAGGCTGGGTGGGAGGAGGCTCGCGCAGCTCTCTGTGATGGAGGAGGT
TCTGACCCCGATGGGGATTACAGCCTGGATAAAATTCACGCTGAAGCCTCCAAATACCTG
GGAAGAACGTGGTTCCCGGATGTCATGCCTGGCTGG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
