RetrogeneDB ID:
retro_ecab_118
Organism:
Horse ( Equus_caballus )
Location:
1:17358654-17359014 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
62.9 %
Coverage:
53.78 %
Frameshifts:
3
Stop codons:
3
Parental gene:
Parental gene symbol:
SNRPB2
Parental gene aliases:
No gene alias available
Parental gene description:
small nuclear ribonucleoprotein polypeptide B [Source:HGNC Symbol;Acc:11155]
Genomic region (view in browser)
>retro_ecab_118
CAAAGAAAGGAAAAAAGCCAATCTGTGGAATAGACTGCAACAACCACAAACAAAACAGCT
GGTCAGGAAATACCAAATCAGCAAACACCCAGAGACATTCAACCCCAAACCCTCAGGTCC
CCCATTACCCTCTCAACTATGTTGTATTCCTTAATAACTTACCGAAAGAGATGAATGAGA
TGATGTTATCCATGTGATGTAGTCAGTTCCTGGTTTCAAGGAAGTACATTCGGTACCTGG
GAGAGACAACGTTGCTGTTGTTGAATTCGAAAATGACACGCAGGCTGGAGGTGCCAGGGT
ACTTTACGAGGATTTTGGGTCACGCTGCCCCATACCATGAAGATCGCCTAGGTCAAGAAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.5 |
| SRP021940_embryo | 0.14 |
| SRP021940_placental_villous | 0.22 |
| SRP021940_synovial_membrane | 0.31 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
