RetrogeneDB ID:
retro_ecab_124
Organism:
Horse ( Equus_caballus )
Location:
1:42515879-42516705 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
69.86 %
Coverage:
94.3 %
Frameshifts:
1
Stop codons:
5
Parental gene:
Parental gene symbol:
GPS2
Parental gene aliases:
No gene alias available
Parental gene description:
G protein pathway suppressor 2 [Source:HGNC Symbol;Acc:4550]
Genomic region (view in browser)
>retro_ecab_124
ATGCCTTTGCTCCTGGAGTGGCCCATGCTTTCCAGTACAACAGCCAGGGTACTGTGCCAG
CACATCATGATGGAGTGGGAGTTGCATGCAGCAACAGGAAGAAGAGCTGGACAAGGTGAT
GAAGGAAGAGCAGGAGACAAGGATGAAAAAGGACATGGAAGAGAGAATGTCACCAGAGGA
GATCAAGGAACAGATCCTGAAGGTGCAGGAGAAGCTTTTGGCCCTACAGGAAGAGAAGAA
TCTGCTTTTTCTGTAGCTCAAGAAAGTTTCACATGAGGAAGGGAAATGGAGGCGAAAGGA
GCAGAGTGAGCTAACTACTCTGGCATCTGATGCCTGCCCTTGGTGCCTCACTGTTCACAC
AGGAACTCGCCTCCTCAGCACACATAGCAGCCCTGGAGGACACAGTCCCCCAGGCATCCT
CATGGCGACTGACAGAACCTAGCAGATGTTCGGACAGCAAGTGATTACAACCTGGCACTA
CAAGGGCGCAGCAGTTGCCTTTGCAGGGAGCCCAGAGCATGGGCGATTCCCAGAAAGCCC
AGGTGGCACCTATGGGACTGCTTAGCCCCCAACTCTCTATAGGCCCAGCCAGCCAGCCTA
TGGTCCCATGCAGCAGCTCAGAGCACCTTCAGCATTTCCTGCAGTGTGATTCCTGTTTCA
GCCGCAGCCTTAGGCAGTGCACAATGACTTTCAGGCCAGCCAGACAGGGTTTCTCCAGCC
TGGTGGTGTCCTGTCCTTACAAAAGCAGATGGAACACACCAAACAGCAGACCAGCTTCTC
TGACTCATCCTCCCCGTGCCCCATTCACCCCCAAGCTCTGCATCCC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.19 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.05 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
