RetrogeneDB ID:
retro_ecab_140
Organism:
Horse ( Equus_caballus )
Location:
1:117880136-117881438 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
93.81 %
Coverage:
100.0 %
Frameshifts:
2
Stop codons:
1
Parental gene:
Parental gene symbol:
NADK
Parental gene aliases:
No gene alias available
Parental gene description:
NAD kinase [Source:HGNC Symbol;Acc:29831]
Genomic region (view in browser)
>retro_ecab_140
ATGGAAGTGGAACAAGAGAAAGTCAACATGAGTAAGGAGCTGAGTGCAGATGCGGCCTCG
TACCGCTGCTCCGCGTGTCATGGGGACGAGGACTGGGGGCTCAGCCACCCCCATGCGGGG
GCGGGCCAAGTCCCGCAGCTTGTCTGCCGCGCTGGCCCTGGCAAGCACCAAGGAGTTCAG
GAGGACCCGCTCCCTGCACAGGCCGTGCCCAGTGACCACTTTTGGACCAAAGGCCTGCGT
GCTGCAGAACCCCCAGACCATCATGCACATCCAGGACCCTGCTAGCCAGTGGTTGACGTG
GAACAAGTCCCCAAAGAGTGTTCTCGTCATCAAGAAGATCCGTGACGCCAGCCTGCCCCA
GCCCTTCAAGGAGCTCTGCATGTACCTGATGGAGGAGAACAACATGATTGTGTATGTGGA
GAAGAAAGTTCTAGAAGACCCTGCCATAGTGAGTGACGACAGCTTTGGGCCAGTGAAGAG
GAAGTTCTGCACCTTCAGAGAAGATTATGACGACATCTCCAATCAGATCGACCTCATCAT
CTGCCTGGGTGGGGACGGGACCCTGCTCTACGCCTCCTCCCTCTTCTCGGGCAGCGTGCC
TCGGGTCATGGCTTTTCACCTGGCCTCCCTGGGCTTCCTGACCCCCTTCAACTTTGAGAA
CTTTCAGTCCCAAGATACTCAGGTGATACAGGGGAATGCAGCTGTTGTTCTTCGGAGCCG
GCTGAAGGTCAGGGTCGTGAAGGAGCTTAGAGGGAAGATGGCCATCCCCAACGGGATCAG
CGAGAACGGGGTGCTGGCTGCAGACCTGGACACAGAGGTCGGGAAGCAGGTCATGCAGTA
CCAGGTCTTGAATGAGGTGTTGATCGACTGAGGTCCGTCCTCGTACCTGTCCAACGTGGA
CGTCTACCTGGACGGGCACCTCATCACCACGGTGCAGGGCGACGGGGTGATTGTGTCCAC
CCCGACGGGCAGCACAGCGTATGCGGCGACAGCGGGGCCTCCATGATCCACCCCAACGTG
CCAGCCATCATGATCACACCTATCTGCCCCCACTCACTGTCATTCCGGCCCATCGTGGTC
CCTGCGGGGGTCGAGCTGAAGATCATGCTATCACCGGAAGCTAGAAACACCGCCTGGGTG
TCCTTTGATGGACGAAAGAGACAGGAGATCCGCCGCGGAGACAGCATCAGCATTGCTACC
TCTTGCTACCCCGTGCCCTCCATCAGCGTCCGAGACCCCATGAGCAACTGGTTTGAGAGC
TTGGCTCAGTGTCTGCACTGGAACGTGCGGAAGAAGCAGGCC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.46 |
| SRP021940_cerebellum | 0.15 |
| SRP021940_embryo | 1.46 |
| SRP021940_placental_villous | 1.25 |
| SRP021940_synovial_membrane | 1.69 |
| SRP021940_testis | 3.2 |
Parental protein coverage
Changes in the retrocopy sequence
