RetrogeneDB ID:
retro_ecab_15
Organism:
Horse ( Equus_caballus )
Location:
29:28396396-28396846 (+)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
51.68 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
CALM2
Parental gene aliases:
CALM2, CALM
Parental gene description:
calmodulin 2 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1445]
Genomic region (view in browser)
>retro_ecab_15
ATGGCTGAGAAGCTGTCTGAAGAGCAGGTGGCCGAGTTCAAGGAGGCCTTCTCCAGTGTT
GACAAGAATGGGGATGGCACCATCAACACCCAGGAGCTGGGCGCCGTGATGCAGGCCTTG
GGCCACAGTCTGTCGGAGGCCGAGTTGAACGAGCTCATCGCCAGGGTGGACTCTGATGGC
GATGGCGTCATCAACTTCCAAGAGTTCCTGGCGGAGATGGTCAAGAGGAGGAAGGCCTGG
GGCAGTGAGCAGGACCTGCAGGGGGTCTTCCGTGCCTTTGACCTGGACGGTGACGGCCAC
ATCAACGTGGATGAGCTCAAGCAGGCCATAGCCAAGCTAGGGGATGAGGTTTCCGAGGAG
GCGCTGGAAGTCATGATCCGCCAGGCTGACTTGGACCAGGACGGGAAGGTGAGCTACGAG
GAGTTCGTGCGCATCCTCACCCAGAAGTGA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.35 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 3.17 |
| SRP021940_synovial_membrane | 0.55 |
| SRP021940_testis | 0.36 |
Parental protein coverage
Changes in the retrocopy sequence
