RetrogeneDB ID:
retro_ecab_17
Organism:
Horse ( Equus_caballus )
Location:
Un0608:6503-7487 (+)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
99.08 %
Coverage:
99.69 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_17
ATGAGTTTTCTTGGAGGCTCTTTTGGTCCCATTTGTGAGGTCGATGTTGTCCTTAATGAT
GGGGAAACCAGGAAAATGGCAGAAATGAAAACTGAAGATGGCAAAGTAGAAAAACACTAT
CTTTTCTATGATGGAGAATCTGTTTCGGGAAAGGTAAACCTAGCCTTTAAGCAACCTGGA
AAGAGGCTAGAGCACCAAGGAATTAGAATTGAATTTGTAGGTCAAATTGAACTTTTCAAT
GACAAGAGTAATACTCACGAATTTGTAAACCTAGTGAAAGAACTGGCCTTACCTGGAGAA
CTGACTCAGAGCAGAAGTTATGATTTTGAATTTATGCAAGTTGAAAAGCCATATGAATCT
TACATCGGTGCCAATGTCCGCTTGAGGTATTTTCTTAAAGTGACAATAGTAAGAAGACTG
ACAGACTTGGTAAAAGAATATGATCTTATTGTTCACCAGCTTGCCACCTATCCTGATGTT
AACAACTCTATTAAGATGGAAGTGGGCATTGAAGATTGTCTACATATAGAATTTGAATAT
AATAAATCAAAGTATCATTTAAAGGATGTGATTGTTGGAAAAATTTACTTCTTATTAGTA
AGAATAAAAATCCAACATATGGAGTTACAGCTGATCAAAAAAGAGATCACAGGAATTGGA
CCCAGTACCACAACAGAAACGGAAACAATTGCTAAATATGAAATAATGGATGGTGCACCA
GTAAAAGGTGAATCAATTCCAATACGACTATTTTTAGCAGGATATGACCCAACTCCAACA
ATGAGAGATGTGAACAAAAAATTTTCCGTAAGGTACTTTTTGAATCTAGTCCTTGTTGAT
GAGGAAGACAGAAGGTACTTCAAGCAGCAGGAAATCATTTTATGGAGAAAAGCTCCTGAA
AAACTGAGGAAACAGAGAACAAACTTTCACCAGCGATTTGAATCTCCAGAATCACAGGCA
TCTGCTGAACAGCCTGAAATGTGA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.46 |
| SRP021940_cerebellum | 0.5 |
| SRP021940_embryo | 0.62 |
| SRP021940_placental_villous | 1.48 |
| SRP021940_synovial_membrane | 0.47 |
| SRP021940_testis | 3.56 |
Parental protein coverage
Changes in the retrocopy sequence
