RetrogeneDB ID:
retro_ecab_174
Organism:
Horse ( Equus_caballus )
Location:
1:78145488-78145991 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
58.66 %
Coverage:
59.52 %
Frameshifts:
7
Stop codons:
1
Parental gene:
Parental gene symbol:
C9orf78
Parental gene aliases:
No gene alias available
Parental gene description:
chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:24932]
Genomic region (view in browser)
>retro_ecab_174
CAGATGAAAACAGGTGGTATGGACGACATGAGGAGACTGAAGGACAGAGGCACAGAAAAG
ATCAGTAGAGAGGAAGACCCCACCTGAGGACATCATTTTGTGCAGAAACCAACTGACGGC
ACAAGGCTGCACACATGATGAAGAGTGTTAAGATGAAGGTGAAGAGGAAAGGGATCATAG
AACACAGGAGCAGAAAATCAACTCCAAGAATGCAGATCATATGCCTATGAACTTGTAGAA
AACCTCCATGCTTCCTCAGCAAAGAAGACTGTAGAATATCTTCCAAGTGGATGCTGAGCA
GCATCCCCATTGTAGGCCTCCACATGATGCTAAAATAAGAAATATTTTCATGGAGGATGC
TAAGGCTCAGCTGCTGGCAGAGCAGCAGAACAGAAGAAAGACAGTGAGACATTCTGTGGG
TCTACTATTGTGGCTGTGAGTTATGGGCAGCAAACCAATCTTATCACCAGGTTTTCAATG
CCCCTAGACGGAGAACAAAGGAT
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
