RetrogeneDB ID:
retro_ecab_177
Organism:
Horse ( Equus_caballus )
Location:
1:87993545-87994574 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
93.91 %
Coverage:
99.71 %
Frameshifts:
2
Stop codons:
1
Parental gene:
Parental gene symbol:
B4GALT4
Parental gene aliases:
No gene alias available
Parental gene description:
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 [Source:HGNC Symbol;Acc:927]
Genomic region (view in browser)
>retro_ecab_177
ATGGGCTGCAATGTGACTTTCCACCTTTCTTACAAATTCCGGTTACCGTTGCTTCTTACC
TTATGCCTGACGGTGGTTGGGTGGGCCACCAGGAACTACTTTGTAGCTGCTATTCAAGAG
ATTCCTAAAGCAAAGGATTTCATGCCTAATTTCAACAACCCTCTCGTTTTGGAGAAGAAA
CAAACTCTGACCAATGAAGCATCCACGACAACTGCAAACCTTGACAACTGCCCTTCCATG
TCTCCATACCTCAGAGGCCAGAACAAGCTCTTTTTCAAACCGGATCTCACTCTGGAAGAA
GTGCAGGCAGAAAACCCCAACGTGCGCAGAGGACACTATCGCCCGAGGAATGCAGGGCTC
TGCAGCGGGTCGCCATCCTCATTCCACACCGGAACAGGGAGAAGCACCTGATGTACCTGC
TGGAACACCTTCATCCCTTTTTGCATCGGCAGCAGCTGGAGTACGGCATCTTTGTCATCC
ACCAGGCTGGAAGTAAAAAGTTTAATTGAGCCAAACTCTTGAATGTGGGCTATCTAGAAG
CTCTCAAGGATGAAAATTGGGACTGCTTTATATTCCACGATGTGGATCTGGTGCCGGAGA
ATGACCTGAACCTTTACAAGTGTGAGGATCAGCCCAAGCATCTGGTGGTTGGCAGGAACA
GCACTGGATACAGGTTACGTTACAGCGGATATTTTTGGGGGCGTTACTGCCCTAAGCAGA
GAACAATTTTTCGAGGTGAAGGGATTCTCTAACAACTACTGGGGATGGGGAGGCGAAGAC
GATGACCTCAGACTCAGGGTTGAGCTTCATAGAATGAAAATAATCCGGCCAATGCCTGAA
GTGAGTAAATACACGATGATCTTCCATACCAGAGACCAAGGCAATGAAGTGAACACAGAG
CGGATGAAGCTCTTACATCAAGTGTTACGAGTCTGGAGAACAGATGGGTTGACCAGTTGT
GTTTATAAATTACTCTGTGTGGATTATAATCCTCTGTATATCAACATCACAGTGGATTTC
TGGTCTGGC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.02 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
