RetrogeneDB ID:
retro_ecab_179
Organism:
Horse ( Equus_caballus )
Location:
1:104002470-104002992 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
91.95 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
SPRYD7
Parental gene aliases:
No gene alias available
Parental gene description:
SPRY domain containing 7 [Source:HGNC Symbol;Acc:14297]
Genomic region (view in browser)
>retro_ecab_179
AAGGAGATGCCGGCCATGCAGCTGGATACGCAGCACATGGGAGCAGATGTTGTCATTGTG
AAAAATGGGAGAAGAATATGTGGAACAGGAGGTTGTTTAGCCAGTGTGCCTTTACATCAA
AACAAAAGCTACTTTGAATTCAAAATCCAGTCCACAGGAATCTGGGGTATTGGCGTTGCA
ACTCAGAAAGTTAACTTGAATCAGATTCCTCTTGGCCAAGATGTGCACAGTCTGGTGATG
AGAAATGATGGGGCCCTGTACCACAACAACGAGGAGAAAAATAGGCTGCCAGCAAACAGC
CTTCCACAGGAGGGAGACCTAGTGGGTATTACATATGACCAGGTAGAATTAAATGTGTAT
TTGAATGGAAAAAACATGCCTTGTCCAGCATCAGGCATACGAGGGACAATGTATCCAGTT
GTTTATGTTGATGACAGTGCAATTTTGGATTGCCAGTTCAGTGAATTTTATCATATTCCT
CCGCCTGGTTTTGAAAAAATATCATTTGAACAGCAAATCTTC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.06 |
| SRP021940_cerebellum | 0.6 |
| SRP021940_embryo | 0.1 |
| SRP021940_placental_villous | 0.76 |
| SRP021940_synovial_membrane | 0.26 |
| SRP021940_testis | 0.42 |
Parental protein coverage
Changes in the retrocopy sequence
