RetrogeneDB ID:
retro_ecab_209
Organism:
Horse ( Equus_caballus )
Location:
10:10683466-10683880 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
83.33 %
Coverage:
51.49 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
PPHLN1
Parental gene aliases:
No gene alias available
Parental gene description:
periphilin 1 [Source:HGNC Symbol;Acc:19369]
Genomic region (view in browser)
>retro_ecab_209
GAAGAGAGACCTGTTCAGTCTGTGAAAACATCAGGAGACACTTCACCCTCAAGTTCTTCG
GCAGTTCCTTCATCAAAGGTGTTAGACAAACCCAGTAGGCTGACTGAAAAGGAACTTGCT
GAGGCTGCAAACAACTGGGCTGCTGGAAACCTAGGGAAGGCAATTGAAAGCAACTTACCT
GAAATTTCTGAGTACGAGGCGGGACCCACGGCGCCATCGCTCATTGACCAGCCCGAAGGA
CCTGAGTCAAACGCAACAGATGGCACAGAATTATTCGAAGACAGTCAGCTCGCCAGTTGC
TCTAAAGCAGCAGCATCAAAAACCAAAGAGATTGAACAGGTTTATGGACAAGACTGTGAA
ATTTTCAGGATGGTGGCAAAAATGCTGATCGAAAAAGAGCCTTCATTAGAAAAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.15 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
