RetrogeneDB ID:
retro_ecab_21
Organism:
Horse ( Equus_caballus )
Location:
3:42997462-42998629 (-)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
85.27 %
Coverage:
99.23 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
PDHA1
Parental gene aliases:
No gene alias available
Parental gene description:
pyruvate dehydrogenase (lipoamide) alpha 1 [Source:HGNC Symbol;Acc:8806]
Genomic region (view in browser)
>retro_ecab_21
ATGCTCGCTGCCGCCGTCTCCCGCGTGTTGGGAGGAGGGGCCCAGAAGCCCGCTAGCAGA
GTGCTGGTGGCGTCCTGTAACTATTCAAATGATGCCACATTTGAAATTAAGAAATGTGAT
CTTCATCGGTTGGAAGAGGGTCCGCCTGTCACAGCAGTGCTCACCCGGGAGGATGGGCTC
CAGTACTACAGGATGATGCAGACTGTTCGCCGAATGGAATTGAAGGCAGATCAGCTGTAT
AAACAGAAATTTATTCGTGGTTTCTGCCACTTGTGTGATGGTCAGGAAGCTTGTTATGTG
GGCCTTAAGGCCGGGGCAAATCCCTCCGATCACGCGATCACAGCCTATCGGGCTCACGGC
TTATGCTACGCTTACGGACTTTCTGTGCAATCAATTCTTGCAGAGCTGACTGGACGAAGA
GGAGGTTGTGCTAAAGGAAAAGGAGGATCGATGCATATGTACGGCAGGAACTTCTATGGG
GGCAACGGCATTGTTGGTGCTCAGGTACCCCTGGGAGCTGGTGTTGCTCTGGCCTGTAAA
TATAAGGGAAGCAATGAGGTCTGTTTGACTCTGTATGGGGATGGTGCTGCTAATCAGGGT
CAGATATTTGAAGCTTATAATATGGCAGCTTTGTGGAAATTACCTTGTATTTTCATCTGT
GAGAATAATCGCTATGGAATGGGAACAGCTATTGAGAGAGCATCAGCCAGCACTGACTAC
TACAAGAGAGTTAATTTTATCCCTGGACTAAGGGTAGATGGAATGGATGTCCTATGTGTT
CGAGAGGCAGCTAAGTTTGCAGCTGACTACTGTAGATCTGGAAAGGGACCCATAGTGATG
GAGCTGCAGACATACCGTTATCATGGGCATAGTATGAGTGATCCTGGAATCAGTTATCGT
ACCAGAGAGGAAATTCAGAACATAAGAAGTAAGAGTGATCCCATTATGCTTCTCAAAGAT
AAAATGTTGAACAACAAGCTTTCCAGTATTGAAGAATTGAAAGAAATTGATGTTGGAGTG
AGGAAAGAAATTGATGATGCAGCCCAGTTTGCTACAACTGATCCAGAGCCACCACTGGAA
GAATTAGGCCATCATGTCTACAACAATAATCTACCTTTTGAAGTTCGTGGTACAAATCAG
TGGATCAAGTTTAAGTCCATCAGTTAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.09 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 81.17 |
Parental protein coverage
Changes in the retrocopy sequence
