RetrogeneDB ID:
retro_ecab_213
Organism:
Horse ( Equus_caballus )
Location:
10:21966444-21967212 (+)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
96.48 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_213
ATGGCTACCCAAAGGAAACACTTGGTAAAAGATTTCAATCCTTACATCACCTGCTATATC
TGTAAAGGGTATCTGATCAAGCCAACTACAGTGACCGAATGCCTCCATACCTTCTGTAAG
ACTTGTATTGTCCAGCACTTTGAAGATAGCAATGATTGTCCAAGGTGTGGCAACCAGGTT
CATGAGACCAATCCATTAGAAATGTTGAGGTTGGACAATACGTTAGAGGAAATCATATTT
AAACTGGTCCCTGGACTACGAGAACAAGAACTTGAGCGTGAATCTGAATTTTGGAAGAAA
AATAAGCCTCGAGAAAATGGACAAGATGATACTTCAAAAGTTGACAGACCTAAAGTTGAT
GAAGAAGGTGATGAAAATCAAGATGATAAAGACTATCACAGAAGTGACCCACAAATTGCT
ATATGTCTAGATTGTTTACGAAATAATGGACAATCAGGGGACAATGTAGTAAAGGGTTTA
ATGAAGAAATTCATTCGGTGTTCTACACGTGTAACTGTGGGAACTATTAAAAAATTTCTA
AGTTTAAAACTAAAACTTCCAAGTTCTTATGAGTTGGATGTGCTGTGCAATGGTGAAATT
ATGGGGAAGGATCATACTATGGAATTCATCTACATGACGAGGTGGCGACTAAGAGGCGAA
AACTTTCGGTGTCTGAACTGCTCAGCTTCGCAAGTCTGCTCTCAGGATGGCCCTTTATAT
CAGTCATACCCCATGGTATTGCAGTATCGACCGAGAATTGATTTTGGT
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.35 |
| SRP021940_cerebellum | 0.05 |
| SRP021940_embryo | 0.19 |
| SRP021940_placental_villous | 0.22 |
| SRP021940_synovial_membrane | 0.05 |
| SRP021940_testis | 1.48 |
Parental protein coverage
Changes in the retrocopy sequence
