RetrogeneDB ID:
retro_ecab_217
Organism:
Horse ( Equus_caballus )
Location:
10:45643605-45644196 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
72.68 %
Coverage:
60.84 %
Frameshifts:
3
Stop codons:
3
Parental gene:
Parental gene symbol:
AHSA2
Parental gene aliases:
No gene alias available
Parental gene description:
AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast) [Source:HGNC Symbol;Acc:20437]
Genomic region (view in browser)
>retro_ecab_217
GCCAAGTGGGGCCAAGGGGACCTGCACTGGATCATGGAGTAGGAGAGCAGGTGTAACATG
AATAACTGGCACTGGACAAAGCAGATGTCACCAGCTGGTCCAAGGGGAAGCTCTGTGAGC
TCCTGATGGGCATCATTGTGGAGAGCAAGGCTGGCCACTGAGAGATCAGTGAGCTGAAGC
AGGAGGAAGCTTCCTGCAGTAGCCACAAAGGAAAGCCAATTTTCTTCTACAAGTGGAACA
TCAAACTAAGCTGGAAAAGTACAACTAAAGAATCTGGTGCAAAGCACAAGGGATTGATTG
AAACACCCAACTTTTCTGAAGAAAATGAAGTAGATGACACTGAGGTGAATATTAGCAAAA
AGAAAGGAGATAGGGATATACTGAAGGATCTTCCGTAAACTACAGGCACTGCCAAAGTCA
GGGAGGCCCTTGTAAATTACTAAAGGCACTTAAGACAGAATTTATGATGGGAATGATTTT
AGGGACAAAGCTATGGCAACCCAGGAATTGACTGTTAAAAGGAAACTGAGTGAGAACACC
ATGGCCTCATCTCCAGCAGCCTTGTGTGTAAGGGTTCCTACTGTGGCACTG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
