RetrogeneDB ID:
retro_ecab_232
Organism:
Horse ( Equus_caballus )
Location:
10:16587153-16587756 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
63.46 %
Coverage:
95.77 %
Frameshifts:
3
Stop codons:
2
Parental gene:
Parental gene symbol:
EBAG9
Parental gene aliases:
No gene alias available
Parental gene description:
estrogen receptor binding site associated, antigen, 9 [Source:HGNC Symbol;Acc:3123]
Genomic region (view in browser)
>retro_ecab_232
CAGTTTCAGCTACTTGAAGTCTGTGTGTGCCCAGCAACAGTATTGTCACTCCTAAAGGGA
TTAATATGCAGATCTAACAGAGGATGGAAATTAAGTCGAGATCAAATAACTTTGCCAACT
ACAGTTGATTGTTCAAAGTTCCTGGGCAGATGGGCGTTGAAGATGGACCTCCTGGGAGGA
AGATGCACCCACACGTGTAAAGACGGAAGGAGGGACTGGGAAAGTGGCCACACTATGAAA
AACAGCGGGAAACACAAAGGAACCCGACAATTTTAAGGACATGATAACAACTAGAAGGAA
AACTGAGAAAATCAGTATCGAGAAGAGCGAACTATTAAATTTTCACCAGTCAGTTGGGAG
CACAGTTTTCTCTAGTAAATTAGCAACTACACAGGATGTTCCTTTTATGCATCTATCTCC
AGAATTAGGTGACAGAGAGGCCTGGCAAGAAAATACCAGTGCACGGGAAGAAGGTATGGC
CTGGCGAGCAGAAGCTCTGTAGCAGCAGAAAACAGCAGACGGAGAACAAAGAACCGCAGA
AAACAAAGGAAGAAAATGGAAAAGGAAGCACGGGGAGGACAGAAGAAGGAACAATGGAAA
CTG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.3 |
| SRP021940_embryo | 0.12 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
