RetrogeneDB ID:
retro_ecab_25
Organism:
Horse ( Equus_caballus )
Location:
2:60692403-60694575 (-)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
53.82 %
Coverage:
99.25 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_25
ATGAGGATCACACTCCTGATACACTGGCTTGCAGTGTTTCTGTCCTCCTCTGGACACATG
TGGCCTGAGAACCCCCAGTATCACAGTCCCCCAGAAGTGGTGATTCCCTTGAAGTTACCT
CGTACTGGAAGAGGCATGAAACCTCCAGGCATGCTCTCTTACAGCCTGCATTTTGGAGGC
AAGAGACATGTTGTCCATCTGAGGGTCAAGAAGCATTTGCTGTCTAGACACCTTCCAGTG
TTCACCTACACAGACCAGGGTGCTCTCCTTGAAGAAAAGCCTTTTGTTCAGAATGATTGC
TACTATCATGGTTATGTGGAAGGGGACCTGGAATCCCTGGTTGCCCTCAGTACCTGTTCT
GGTGGATTTCAAGGATTGTTACAGATAAATAGCATTGTTTATGAAATTGAGCCCATGGAT
TTTTCTCCCAAATTTGAACATCTGGTATATAAAATGGATGAGACCCAATTCCCAACCACA
AAATCTGACATTATGCAAGAGGACACTGTACACCAATTGGAGTTTCAAGAGACTGATAAT
TATACTCTGAAGCAAAGTTCTTATGTGGGCTGGTGGGTCCATAAGTTCCTTGTTGAAATG
GCAGTGATTGTGGACCATACTCTCTACCTTCATTATGAAAAGAACGTCTCAAAGTTGCAG
GATGATCTATATGTTATTGTAAATATAGTGGATTCCATTTATGAGGTAATGGGTATTAAG
TTGTTATTACTTGGTATGGAGGTCTGGACTGAAAAAAACTACTTTGAAGTAGGTGATATA
AGCAGATCTCTGAAGCAATTTTGTGAGTGGAAGTCCAAAAATTTTGCTCCCCGCGTGTCA
CATGATACTGCACATCTTTTTACATATAAGACATTAAGAGGATTAACTGGTTTAGGCTTC
GTTGCAGGGCTGTGTAAATCACACAGAAATTGTGCAGTTGTTACTTGTGTTAACAAAACC
TTGTCCATTATTGGAATTGCAATGGCTCATCATCTAGGTCATAATTTGGGGATGTTTCAT
GATGCTGACGAGTGTAAGTGTGCACATCCTACATGTATAATGCGCTATGATAACCCACCA
ATAACTCAATTTAGCAATTGTAGTTATAATTTCTTTTGGGAATATTCTATACGCCAGGCA
AAATGTTTGATGTACACTGTGCATACAAAGGATGTGTTTACAATGAAGCGCTGTGGGAAT
GGCATTGTTGAAGAAGAAGAGGAGTGTGACTGTGGAATTTTAAGGAGTTGTTCAAAAGAT
CCCTGTTGTCTGTCAAACTGCACTCTGAGTTTTGGATCTATTTGTGCTTTTGGGCTTTGT
TGCAAGGACTGCGAGTTTTTACCATCAGGGAGAGTATGTAGAAAGAAAGTCAATGAATGT
GATCTTCCAGAGTGGTGCAATGGAACATCCCATATGTGTCCAGATGATGTATATGTGGAG
GACGGAATTCCTTGTAATAGCAGTGCCTACTGCTATGAAAAAAGCTGTCATAACCGTGAT
GAACAGTGTAGGCAGATCTTTGGCCAAGAGGCAAAGAGTGCAAATAACAGTTGTTACAAA
CGAGTAAACACTAAAGGTGACCGTTTTGGTAACTGTGGTTTCAAAGACTTTTCATATGTA
AAATGTGATAGCTCAGATAGCCTGTGTGGGAGGGTTCAGTGTGAGAATGTGACAAAAATT
CCCCTTTTGAGTGATCATTCTACTGTGCATTGGACTCGCGTCAATGGTGCCATCTGCTGG
GGTATAGACTACCATTTTGGGATGACTACACCTGATATTGGTGATGTGAAAGATGGCACA
GAGTGTGGCCCAGAACACGTCTGCATCCACAGGAAGTGTGTCCATTTATCTCGCTTGGAT
AGTAATTGTTCACCTAAGTTTTGTAACATGAGGGGGATCTGTAACAATAAACATCACTGC
CATTGCAACTATATGTGGGACCCTCCCAATTGCCTAATAAGAGGCAGTGGAGGTAGTATC
GACAGTGGCCCACCCCCTAAGAGAGAGAAGATTAAGAAGATTTACGTGTTAGGATTTGTG
CTTTTTTGGTTGATTGTTTTATTATGTTGTCTTCTTTTGCTTTGTAAGAAGAAAAAATCT
AAGAAAAAAGACCAAAAAGTTCAGGCTGAAGTTAAAAAAGCAGAAAATGTCAAGACACAA
CAACCAAAAGAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.02 |
| SRP021940_placental_villous | 0.04 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 59.04 |
Parental protein coverage
Changes in the retrocopy sequence
