RetrogeneDB ID:
retro_ecab_250
Organism:
Horse ( Equus_caballus )
Location:
11:4452120-4452507 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
55.22 %
Coverage:
86.67 %
Frameshifts:
3
Stop codons:
1
Parental gene:
Parental gene symbol:
UBE2V1
Parental gene aliases:
No gene alias available
Parental gene description:
ubiquitin-conjugating enzyme E2 variant 1 [Source:HGNC Symbol;Acc:12494]
Genomic region (view in browser)
>retro_ecab_250
GTAAAATTTACCCCAAATTTTCACTCCCTGGGAGAACTTGAAGAAGGCCAAAGATTAGGT
GATAGTACAGTTAGCTGGAGTCTCTAAGACGATGAAGATATGTTGCTTACAAGGTGGACA
GCCATATAATTGGGCCTCCAAGGACAAATTACAAAAACAAATATATCGCCTCAAAATGGC
AAGTGAATCTAAATACCCAGAAGCTCCCTTATCCTTTAGATTTGTAACAAAAAGTAGTAT
GAATGGAATAAGTAATCCAGTAGAATGGTGGATATACAGAGCATACCATCCAGTGTTAGC
AAAGTAACAAAATACAAAACCAATAAAGTTGCATTTTCAGATCTAAGACATTTAATGATG
TCCAAAGAATATACGAAACTTCTGCAG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.1 |
| SRP021940_embryo | 0.1 |
| SRP021940_placental_villous | 0.04 |
| SRP021940_synovial_membrane | 0.05 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
