RetrogeneDB ID:
retro_ecab_261
Organism:
Horse ( Equus_caballus )
Location:
11:16868602-16869001 (-)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
77.94 %
Coverage:
66.5 %
Frameshifts:
3
Stop codons:
0
Parental gene:
Parental gene symbol:
NDFIP1
Parental gene aliases:
No gene alias available
Parental gene description:
Nedd4 family interacting protein 1 [Source:HGNC Symbol;Acc:17592]
Genomic region (view in browser)
>retro_ecab_261
GAGGAAGAGCCCAGGGAAACTGAACAGGCCACAGATGCTGCTCCTCCACCTTATAGCAGC
ATCTCTGCAGAGTACAGCATATTTTGACTACAAAGATGAGTCTGAATTTCCAAAGCCTCC
ATCTTATAATGTGGCTACAACACTGTCCAGTTTTGATGAAGCCGAGAGAACCACGGCTGA
AGCTGCCATACCTTTGGTTCCTGGAAGAGATGAGGATTTTGTGGGTCAGGCTGATTTTGA
TGATGCTGACCAAATGAACATAGGAAATGATGAGATTTTTCTTGTTAACTTTTTTTCATG
GCATTCCTCTTTAACTGGATCAGGTTTTTCGTGTCTTTTTGCCTAACCACCTCAGCTGCA
GGAAGGTATGGAGCCATTTCAGAATTTGGTCTCTTTCTA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.02 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.05 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
