RetrogeneDB ID:
retro_ecab_262
Organism:
Horse ( Equus_caballus )
Location:
11:23309426-23309929 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
69.71 %
Coverage:
100.0 %
Frameshifts:
4
Stop codons:
2
Parental gene:
Parental gene symbol:
TIMM17A
Parental gene aliases:
No gene alias available
Parental gene description:
translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:HGNC Symbol;Acc:17315]
Genomic region (view in browser)
>retro_ecab_262
GAGGAGTATGAGCTAGAGCCGTGCCCTGGTGAACTATGGAAGACCATGATGGGCCTTTAC
CATGGGAACCATAGGTGGCGGGGTCTTTCAAGCAATTGAAGGTTTTTGTCATTCTCCAGT
AGGAATGAACCAGAGACTACAAGGGAGTTTGACAGCTATTAACACCAGGTCTCCACAGTT
GGGAGGTAGCTTTGCAGTTTGGGGAGGTCTGTGTTCCATGACTGACTGCAGTATGGTTAG
AGAGAACGAAGATCTGTGGAACTCCATCACCAGTCTGCCTCAACAGGAACCACAATGGCA
GCAAGAAATGGACGAGTGGCTATGGTTGTTGGGTCAGCTGTGACGGGTGGCATTCTCCTA
GATTTAACTGGAGGAGCTGGTACCTTGTTGACAAGAATTGCCTTTGCGCACTTTCCCAGT
GGTCCTTAGTTTACTGAGACCCCTCCCGGTTGCCTTCAACCCAGTTACCACCCTCACCTT
TTAGAGACTATGGACAATACCAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.05 |
| SRP021940_placental_villous | 0.04 |
| SRP021940_synovial_membrane | 0.23 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
