RetrogeneDB ID:
retro_ecab_264
Organism:
Horse ( Equus_caballus )
Location:
11:24920309-24920680 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
92.8 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
0
Parental gene:
Parental gene symbol:
HINT1
Parental gene aliases:
No gene alias available
Parental gene description:
histidine triad nucleotide binding protein 1 [Source:HGNC Symbol;Acc:4912]
Genomic region (view in browser)
>retro_ecab_264
ATGAGATCACTGAGGCTCAGGCCGCTTGGCCTGGTGGGGACACGATCTTCCGGAAGATCA
TTCACAAGGAAATCCCAGCCAAAATCATTTTTGAGGATGACCAGTGCCTTGCTTTCCGTG
ACATTTCCCCTCAAGTGCCAACACATTTTCTGGTGATACCCAAAAAACATATATCCCAGA
TTTCTGTAGCAGAAGATGATGATGAAAGTCTTCTTGGACATTTAATGATTGTTGGCAAGA
AATGTGCTGCTGATCTGGGCCTGAAGAACGGTTACCGAATGGTGGTGAATGAAGGTTCAG
ATGGGGGCCAGTCTGTCTATCATGTTCATCTCCATGTGCTTGGAGGTTGGCAGATGAATT
GGCCTCCTGGT
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 1.74 |
| SRP021940_cerebellum | 3.48 |
| SRP021940_embryo | 2.73 |
| SRP021940_placental_villous | 3.44 |
| SRP021940_synovial_membrane | 1.61 |
| SRP021940_testis | 3.14 |
Parental protein coverage
Changes in the retrocopy sequence
