RetrogeneDB ID:
retro_ecab_270
Organism:
Horse ( Equus_caballus )
Location:
11:60508261-60509389 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
87.96 %
Coverage:
72.36 %
Frameshifts:
5
Stop codons:
1
Parental gene:
Parental gene symbol:
PPAT
Parental gene aliases:
No gene alias available
Parental gene description:
amidophosphoribosyltransferase [Source:RefSeq peptide;Acc:NP_001098786]
Genomic region (view in browser)
>retro_ecab_270
GGGAAAATAGCTGTGGCACATAATGGCGAATTGATAAATGCTGCTCAATTAAGGGAAAAG
CTTCTGCGTCATGGTATTGGTCTGTCAAGAAGTTCCGATAGGGAAATGATTACCCAGTTA
CTGGCATATACCTCACCTCAGGAACAAGATGACACCCCAGACTGGGTGGCAAGGATTAAA
AACTTAATGAAGGAAGCACCTACAGCATACTCCCTGCTTATAATGCACAGAGATGTTATT
TATGCAGTACGAGATCCTTATGGAAATTGTCCTCTATGCATTGGTCGTCTTATTCCTATA
TCTGATATAAATGATAAAGAGAAAAACTCTTCAGAAACCGAAGGATGGGCGGTATCTTCA
GAACCTTGTAGCTTTTTATCTGTTGGTGCAAGATATTACCGTGAAGTCTTACCTGGAGAA
ATTGTGAAAATATCCAGACATAATGTCCAAACACTTGATACTATACCAAGGTCTGAAGGA
AAACCAATGGCTTTTTGTATTTTTGAATATGTTTATTTTGCAAGACCAGATAGTATATTT
GAAATCCAAATGGTTTATACAGTGAGGTACTGTTGTGGTCAGCAGCTGGCAATTGAACCA
CCTGTGGATGCAGATTTGGTTAGCACCGTTCTGAATCTGCTACACCCGCTGCTCTTGGTT
ATGCAGGAAGGTGTGGGCTTCCCTATGTGGAGGTGCTGTGTAAAACCCGGTATGTAGGAA
GAACCTTCATTCAGCCAAACATGAAGTTAAGACAACTTAGTGTTGCAAAAAAAATTTGGA
GTAGTGTCAGACAACTTCAAAGGCAAAGGAATTGTTCTTGTAGATGATTGGATTGTAAGA
GACAATATGACCTCACCCATAATCAAATTGCTCAAAGAATCTGGTGCAAAAGAGGTACAC
ATTTGAGTAACTTCACCACCAATTAGATATCCATGCTTCATGGGAATAAACATACCAGCA
AAAGAAGAGCTTTTGCCAATAAAGCAGAATTTGAACATCTTGCAGAATATCTAGGAGCAA
ACAGTGTTGTGTATCTGTCAGTAGAAGGACTGGTTTCATCTGTACGAGAAGGGATAAAAC
AAAGAATAGAAAGAGAAAATGCAAGATATTATGATTCAAGAAAATGGG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
