RetrogeneDB ID:
retro_ecab_274
Organism:
Horse ( Equus_caballus )
Location:
12:9018995-9019693 (-)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
56.17 %
Coverage:
90.23 %
Frameshifts:
1
Stop codons:
0
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_274
AGTTCTGGAGTTACTTCACAAGAGACTGAAACTTTAAAGAACCAATCAGAAATACTAGAG
ATGAAAAACACAATGGACCAGATAAAACAGAATATGGATTCCCTGAATGCCCGTGTGGAC
GCCATAGAGGAGCAAATCAGCATAACTGAAGATAGGTTGAACGGCTCCAGACAGAGGAAG
AGAGAGACTAAAGGACTAAAAAGGAATGAAGAAAATCTCCGAGAAATAGCCAACTTAACG
AGCAAATGCAAAGTAAGAATAAGTGGAATCCCTGAGGGTGACGAAAAGGAGAATGGAACA
GAAAGCGTGGTCAAAGAAATAGTAGCAGAGAACTTCCCAAATCTAGGGAATGAGAGAGAA
AGGTGGGTGGAGGAAGCTTTCAGGTCTCCTACATATGTCAATGTAAAAAGACCTACTGCA
AGGCATATAGTAGTAAAACTGGCAAAAGTGAATGACAAAGAAAGAATACTTAGGGCAGCA
AGGCAGAAGAAAATAACAAAGGAACCACTGTCAGACTTTCAGAGGATTTCTCTGCAGAAA
CCTTACAAGCCAGGGGAGAATGGAATGACATATTCAAAACTTCAAAAGATAACAATCTTC
AGCCAAGAATACTCTATCCAGCAAAAATATCCTTCAGATATGGAGAAATGAAACCTTCCC
CAAAAAAACAAAAGCTAACGGACTTTGTAGCCATGAGA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.52 |
| SRP021940_cerebellum | 0.25 |
| SRP021940_embryo | 0.91 |
| SRP021940_placental_villous | 0.4 |
| SRP021940_synovial_membrane | 0.63 |
| SRP021940_testis | 0.18 |
Parental protein coverage
Changes in the retrocopy sequence
