RetrogeneDB ID:
retro_ecab_277
Organism:
Horse ( Equus_caballus )
Location:
13:11866988-11867644 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
59.73 %
Coverage:
88.89 %
Frameshifts:
2
Stop codons:
1
Parental gene:
Parental gene symbol:
RWDD1
Parental gene aliases:
No gene alias available
Parental gene description:
RWD domain containing 1 [Source:HGNC Symbol;Acc:20993]
Genomic region (view in browser)
>retro_ecab_277
TCATTATCTGGAATTACCAGGAAACCCCCCAGCTTCACCATCACTCTGACATCTGAGGCT
GGAGAAAACAGCAAACCTGTCCAGACCACATTCAAGTTCACGTACAGTGAAAAACACCCG
GATGAAGCCCCCTTAATGCAATATTCTCCCAGGAAAATATCTAGAAGACAAGGATGTCTC
CGGCACTTTAAAATTATTAGCACTACAGGCAGAAGAAACCCTTGGCATGGTGATGATTTT
TACTTTAGTGTTGGCTGCACACGAAAAATTATATGAAATAGTAGATCAAATCAAAACCAG
AAGAAAGGCAGGAAGACAAGATACAAAACGGGAAGAAAGTAGGAGCCAAAAAGCAATTAT
TTCATGGTGCTCCTGTTACGATTGAGAATTTCTTAAGTTGCAAGGCCAGGTTTAATGCAA
GACTCTTGGAAATTAAAAAGAAACGTGTGGAAGCAGAACAACAAGCGGGAGAAAGCTGAT
TCGGTGGGAAACAGCGATTCGAATGCTCGTCTCGATTCGTCTTTGACTCTGATGTGTCTG
ACAGCTGGTTGCACGGGTGCTGCCAGCACGTGGAGGTGGACGAGGCTCTGCGCCGGGAAC
CGGCAGACTTGGAGCTGGAGCATGCCCATGGTCCAGGCTGCAATCCTGCTGACCCG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.05 |
| SRP021940_embryo | 0.29 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.03 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
