RetrogeneDB ID:
retro_ecab_279
Organism:
Horse ( Equus_caballus )
Location:
13:17924339-17924673 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
64.04 %
Coverage:
74.32 %
Frameshifts:
2
Stop codons:
0
Parental gene:
Parental gene symbol:
CALM1
Parental gene aliases:
No gene alias available
Parental gene description:
calmodulin 1 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1442]
Genomic region (view in browser)
>retro_ecab_279
CTTGGGCAAAATGCCATAGAAGCAAATTTTCAGGATAAATTAATGAAGCAAATGATGATG
AAAATACTGCAATTGACTTTCTGGACTTTCTGACAATGATGACAAGAAAAATGAAAGAAA
CAGAGACAAAGAGTAAAGAAGAAATTAGAGAAATATTTCTTGTATTTAATAAGGATAACC
TGGCTATCTTAATGCACCAGAAGTACGTCACACGATAAAACACCTTGGAGAAAATTTAAC
AGATGAAGAGGTTGATGAAATGATCAGAGAAGCAGATATTGACAGTGATAGTCAAGTAAA
CTATGAAGAATTTATGTCAATGATGTCACCAAAG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.17 |
| SRP021940_cerebellum | 0.35 |
| SRP021940_embryo | 0.38 |
| SRP021940_placental_villous | 0.58 |
| SRP021940_synovial_membrane | 0.42 |
| SRP021940_testis | 0.24 |
Parental protein coverage
Changes in the retrocopy sequence
