RetrogeneDB ID:
retro_ecab_280
Organism:
Horse ( Equus_caballus )
Location:
13:20550217-20550622 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
78.52 %
Coverage:
62.79 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
RAB5B
Parental gene aliases:
No gene alias available
Parental gene description:
RAB5B, member RAS oncogene family [Source:HGNC Symbol;Acc:9784]
Genomic region (view in browser)
>retro_ecab_280
CAGTGGAGAAGTCTAGCTTGGTATTACGATTTGTCAAAAGGCAGTTCCATGAGTACCAAG
AGAGCACCATTGGAGGAAACCTTTGCTCGAGCAAAGACATGGGTAAAGGTACTACAGCGA
CAGGCTAGTCTTAGCATCATTATTGCCCTGGCAGGGAACAAAGCTGACCTGGCCAACAAG
CGCATGGTGGAGTATGAAGAGGCCCAGGTGTATGCAGATGACAACAGCTTATTGTTTATG
GAGACCTCAGCCAAGACAGCTACGAACGTGAATGACCTCTTCCTGGCAATAGGTAAGAAG
TTGCCAAAGAGTGAACCCCAGAATCCAGGGGGTGCAGCAGGCCGAAGCCAGGGTGTGGAT
CTCCATGAGCACTCCCAGCAGAACAAGAGCCAGTGTTGTAGCAAC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.05 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.05 |
| SRP021940_testis | 0.12 |
Parental protein coverage
Changes in the retrocopy sequence
