RetrogeneDB ID:
retro_ecab_287
Organism:
Horse ( Equus_caballus )
Location:
13:19396971-19397518 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
82.16 %
Coverage:
82.81 %
Frameshifts:
2
Stop codons:
0
Parental gene:
Parental gene symbol:
FAM60A
Parental gene aliases:
No gene alias available
Parental gene description:
family with sequence similarity 60, member A [Source:HGNC Symbol;Acc:30702]
Genomic region (view in browser)
>retro_ecab_287
CAGAGTTGGTTTGGGTTGCATGAGACTCGTTCAGTAGACATCTGTAATGCCTGTGGCCTG
CTTGTGAAAAGATGGAAGGAATTGCCAGAGGATCAAAAAAACCCTGGAATCAAGTGGTAG
ATACAAGAACAGGACCCAATCTAAAGATTACATTGAAACCAAAGAAAGTGAACACTCTAT
CTGGAAACAGGATAAAAAGCAACCATGTCAGTAAACTGCAGAAGGAATTCAAACGTCACA
ATTCTCATGCTCATGGTAACACCTCAAGTTCCTCCCCAGCTCACTCTCCTTGTTATAGTA
ACCAATTGGATGATGGCTCGGATACAGCGATGGCTTCTGGCTTTAGCAGAACACCAGTTT
TTCCTTTTTAGATCTCACATACTGGAAAAGACAGAAAATATGTTGTGGGATTATCTATAA
AGGCCGTTTTGGGGAAGTCCTCATCAACACACATCTATTCAAGCCTTGCTGCAGCAATAA
GGAAGCAGCTGCTGAGAAGCAGGAGGAGCAGGGGCCCGAGCCTCTGAACATCTCCACTCA
GGAGTGG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.1 |
| SRP021940_embryo | 0.1 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.05 |
| SRP021940_testis | 0.12 |
Parental protein coverage
Changes in the retrocopy sequence
