RetrogeneDB ID:
retro_ecab_288
Organism:
Horse ( Equus_caballus )
Location:
13:19674539-19675297 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
92.19 %
Coverage:
74.19 %
Frameshifts:
3
Stop codons:
2
Parental gene:
Parental gene symbol:
CAB39
Parental gene aliases:
No gene alias available
Parental gene description:
calcium binding protein 39 [Source:HGNC Symbol;Acc:20292]
Genomic region (view in browser)
>retro_ecab_288
TTGAAGGAAATTCCGTATGGTACAAATGAAAAAGAACCACAGACAGAAGCGGCGGCCAAC
TCGCTCAAGAACTCTGTAACAGTGGGCTCCTTAGCACCCTGGTAGCTGACTTACAGCTCA
TTGACTTTGAGGGCAAAAAAAGATGTGGCTCAAATTTTCAACAATATTCTCAGAAGACAA
ATTGGTACAAGAACTCCCACTGTTGAATACATCTGCACCCAACAGAATATTTTGTTCGTG
TTATTGAAAGGGTATGAATCTCCAGAAATAGCTCTAAATTGTGGAATAATGTTGAGAGAA
TGCATCAGACACGAACCACTTGCAAAAATCATTTTTGGTCAGAACAATTTTATGATTTCT
TCAGATGTGTCGAAATGTCAATATTTGACGTAGCTTCAGATGCATTCGCCACATTCAAGG
ATTTACTTACAAGACATAAATTGCTCAGTGCAGAATTTTTGGAACAGCATTATGATAGAT
TCTTCAGTGAACATGAGAAGTTACTTCATTCAGAAAATTAGGTGACAAAAAGACAGTCAC
CCAAGCTTCTCGGTGAGTTACTATTAGACAGACACAACTTCACGATTATGACAAAATCCA
TCAGTAAACCTGAGAACCTCAAATTAATGATGAACCTTCTGCGAGACAAAAGTTGTAACA
TCCAATTTGAGGCCTTTCACATTTTTAAGGTGTTTGTAGCCAATCCTAACAAGACACAGC
CCATCCTCAACATCCTCCTCTAGAACCAGACCAAACTC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
