RetrogeneDB ID:
retro_ecab_29
Organism:
Horse ( Equus_caballus )
Location:
7:12875287-12876052 (+)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
98.03 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_29
ATGGCCTCGTTGCTGAAGGTGGATCAGGAAGTGAAGCTCAAGGTTGATTCTTTCAGGGAG
CGGATCGCAAGTGAGGCAGAAGACTTGGTGGCAAATTTTTTCCCAAAGAAGTTGTTAGAA
CTTGATAGTTTTTTGAAGGAACCAATCCTAAACATCCATGACCTAACTCAGATCCACTCA
GACATGAATCTCCCAGTCCCTGACCCCATTCTTCTCACCAATAGCCACGATGGACTGGAC
GGTCCCACTTACAAGAAGCGAAGGTTGGATGAATGTGAAGAGGCCTTCCAAGGAATCAAG
GTGTTTGTGATGCCCAATGGGATGCTTAAAAGCAACCAGCAGCTCGTACACATTATTGAG
AAAGTGAAACCTGGGATTCGGCTGCTGATCAAGAAATGCAACACGGTCAAAATGTGGGTA
CAGCTTCTGATTCCTAGGATAGAAGATGGGAACAACTTTGGGGTGTCCATTCAGGAGGAG
ACAGTTGCAGAACTAAGAACCGTTGAGAGTGAAGCTGCATCTTATCTGGACCAGATTTCT
AGATATTATATTACAAGAGCCAAATTGGTTTCTAAAATAGCTAAATATCCCCATGTGGAG
GACTATCGCCGCACCGTGACAGAGATTGATGAGAAAGAATATATCAGCCTTCGACTCATC
ATATCCGAGCTAAGGAATCAATATGTCACTCTACATGACATGATCCTGAAAAATATCGAG
AAGATCAAACGGCCCCGGAGCAGCAATGCCGAGACACTGTACTGA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.29 |
| SRP021940_cerebellum | 0.2 |
| SRP021940_embryo | 0.29 |
| SRP021940_placental_villous | 0.4 |
| SRP021940_synovial_membrane | 0.57 |
| SRP021940_testis | 0.89 |
Parental protein coverage
Changes in the retrocopy sequence
