RetrogeneDB ID:
retro_ecab_320
Organism:
Horse ( Equus_caballus )
Location:
14:80441767-80442501 (-)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
90.69 %
Coverage:
80.39 %
Frameshifts:
1
Stop codons:
1
Parental gene:
Parental gene symbol:
DGAT2
Parental gene aliases:
No gene alias available
Parental gene description:
diacylglycerol O-acyltransferase 2 [Source:HGNC Symbol;Acc:16940]
Genomic region (view in browser)
>retro_ecab_320
GAGCTGGTGAAGACGCACAACCTGCTCACCACCAGGAACTACATCTTTGGGTACCACCCC
ACGGCATCATGGGCCTCAGTGCCTTCTGCTACTTCAGCACAGAGGCCACGGAAGTGAGCA
AGAAGTTCCCTGGCATACGGCCCCACCTGGCCACGCTGGCCGGCAGCTTCCGGAGGCCAG
TGCTGAGGGAGTACATGGTGTCTGGAGGCATCTGCCCTGTGAACCAGGACACAGTAGACT
TGCTTTCAAAGAATGGGAGTGGCAATGCCATCATCCTCGTTGTGGGGGGCGCGGCCGAGT
CCCTGAGCTCCATGCCCGGCAAGAACGCGGTCACCCTGCGCCACCGCAAGGGCTTAGTGA
AACTGGCTCTGCGCCATGGAGCCGATCTGGTTCCTTTCTACTCCTTCGGGGAGAACGAGG
TGTACAAGCAGGTAATCTTTGAGGAGGGCTCCTGGGGCCGCTGGGTCCAGAAGAAGTTCC
AGAGGTACATCGGCTTCGCCCGGTGCATTTTCCATGGCCGAGGCCTCTTCTCCTCTGACA
CCTGGGGGCTCCTGCCCTACCCGAAGCCCATCACCTCCGTCGTGGGTGAGCCCATCACCA
TCCCCAAGCTGGAGCACCCAACCCAGCAGGACATCGACCTGTACCACACCATGTACATGG
AGGCCCTGGTGAACCCCTTCTACAGGCACAAGACCAAGTCTGGCCTCCCGGGGACTGAGG
TCCTGGAGTGAACT
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.05 |
| SRP021940_embryo | 0.02 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
