RetrogeneDB ID:
retro_ecab_337
Organism:
Horse ( Equus_caballus )
Location:
15:74105955-74106279 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
56.25 %
Coverage:
64.88 %
Frameshifts:
3
Stop codons:
2
Parental gene:
Parental gene symbol:
TPT1
Parental gene aliases:
No gene alias available
Parental gene description:
tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:12022]
Genomic region (view in browser)
>retro_ecab_337
GAGATCACTAATGGGCTGTGCCTTGCCAGGCTGGGAAGATGATCAGCAGGACAGAGGGTA
ACAATGATGTCTTGCTCATTGGTCTGGATGCCTCTGCTGAAAGTCCAGAAGGAAAAGAAG
TATATACTGCAGTAATCACTAGTGTTGATATAGTCGTGAAGTATCAATTACAAGAAACAA
GCTCAAAAATGAATCTTACAAAAAGTGCCTCAAAGACTACATAACATCAATCAAAGGTAA
GAATGAATAATAAAAACTAAAAAGATTAAAACCTTTTATGATTCTACTGTAGAACAAATC
AACTATTTTCTTACTAATTTCAAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.02 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
