RetrogeneDB ID:
retro_ecab_341
Organism:
Horse ( Equus_caballus )
Location:
15:88054484-88054977 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
65.9 %
Coverage:
97.67 %
Frameshifts:
5
Stop codons:
2
Parental gene:
Parental gene symbol:
RPS27A
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S27a [Source:HGNC Symbol;Acc:10417]
Genomic region (view in browser)
>retro_ecab_341
TTTCCAATCATCATCTGCGCTGGAAGCATCACCAAGATGAAGATATTTGTAAAACCTTTA
GGGGAAGCCCATCATTCTTGAGGTGGAAACATTGGATACAATAAAAAATGTAAAGGCCAA
GATCCAGGATGAGGAAGGACTCTCTCTCGATCAGCAAAGACTGATCTTACTGGCAAGAAA
CTGGAGATGGACATGCTTTGCCTGACTGTAGCATTCAAAGGAGTCCACTGTTTACCTTGT
GTTGAGACTGTGGTGGAACTAAGAAAAGGAGGAAGTCTTATACCACTCCCAAGAAGAATA
AGCATAAGAAAAAGAAGTTTAAGCTGGCTGGCCTGAAATACTACAAGGTGAATGAGAATG
GCAAAATTAGTCTCCTTTGTTGGGAGTGCTCCTCAGATAAATGTGGTGCTGGAATTTTAT
GGCCAGCCACTTTGACAGATGTTATTATGACAAATGTTGCTTTACCTATTGTTTCAATAA
ACCAGAAGACAAG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
