RetrogeneDB ID:
retro_ecab_347
Organism:
Horse ( Equus_caballus )
Location:
15:33094633-33095245 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
55.0 %
Coverage:
64.49 %
Frameshifts:
7
Stop codons:
1
Parental gene:
Parental gene symbol:
CCDC94
Parental gene aliases:
No gene alias available
Parental gene description:
coiled-coil domain containing 94 [Source:HGNC Symbol;Acc:25518]
Genomic region (view in browser)
>retro_ecab_347
TTTGACCAGTCAAAGATCCTCAAGCTCAGGGTCCCCAGGACTGGCACCATGTGGTGCGGT
CAACGGCCCCTTCAGCCCGACGTGTGAGACCTGAGGAGAATACAGCTACGGGGGAAAGAA
ATTCGACGCGCAAAGAGAGGGCGCAGAACAGGCCTCCAGGGACCCGCCCACCTTCCGTTT
CCGCTTCCGGTTCTGTTTCCGTACGTCGAGTGCGTGCGCTACCAGGCAGACAGCACCTTC
AAGACAGACCCCGAAGGCACGGACTGCACCGTGGAGCACAGGGCTACAGGGAACTTCCAG
GCCGAGAAGCCCCTGGAGCAGGAGGAGAAGAGGCTGCGGGAGGACGAGGGGCTGAGCAAC
CCCATGAAAGTTGCTGGAGAGACCAACCCAAAGCCTCAGGCTGGGATGGAGACTGGAGAA
CCTGCAGGAGCTCGAGGACCTGAGCCGGCGGAGGCCCCCAGGGACTTTGAGGCCGCACTG
CGGCAGCACCGCCTGCGAGGAGGACGGGCAGGAGCAGGAGGAGGACGAGAGGGAGACGGC
GGCCTTAGTGGAAGAAGCTAGCAAACGAAGACCGCTGGAGACTCCCATTCAGAGGAGGAT
GCTGCTGCTCCC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.12 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.08 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
