RetrogeneDB ID:
retro_ecab_360
Organism:
Horse ( Equus_caballus )
Location:
16:41618421-41618609 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
71.83 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
2
Parental gene:
Parental gene symbol:
SHFM1
Parental gene aliases:
No gene alias available
Parental gene description:
split hand/foot malformation (ectrodactyly) type 1 [Source:HGNC Symbol;Acc:10845]
Genomic region (view in browser)
>retro_ecab_360
ATGTCAGAGAAAACGCAGCCAGTAGACTTAGGTCTCCTGAAGGAGGACGAGTTCCCTGCG
GAAGACAAGGCTGGTTTAGATGAAGATGCACATGTCTGGGAGGATAATTAGGATGATAAC
AATGTACAGGATGACTTCTCCAGTTATGAGCCGAACTAGAGAAACATGGTTATAAGATGG
AGACCTCA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.05 |
| SRP021940_embryo | 0.22 |
| SRP021940_placental_villous | 0.04 |
| SRP021940_synovial_membrane | 0.05 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
