RetrogeneDB ID:
retro_ecab_377
Organism:
Horse ( Equus_caballus )
Location:
16:37386066-37386678 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
77.94 %
Coverage:
95.33 %
Frameshifts:
0
Stop codons:
2
Parental gene:
Parental gene symbol:
RPL14
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L14 [Source:HGNC Symbol;Acc:10305]
Genomic region (view in browser)
>retro_ecab_377
TTCATGGAGGTTGGCTGGGTGACCTACGTCTCCTTTGGGCCTCATGCAGGGAAGCTGGTT
GCGACTGTAGATGTTATTGATCAGAACAGGACTTTGGTCGATGGTCCTTGCACTCAGGTG
AGGAGACAAGCTATGTCTTTTAAATACATGCAGCTCACTGACTTCATCCTATAGTTTCCA
CACAGTGCCCGCCAGAAGTACATCCAACAAGCCTGGCAGAAGGCAGATATCAATACAAAC
TGGGCAACCACAAGATGGGCCAAGAAGATGGAAGCCAGAAAAAGGAAAGCCAAGATGACA
GATTTTGATGGTTTTAAAGTCATGAAGGCAAAGAAAATGAAGAACAGAATAATCAAGTTT
GAAGTCAGGAAGCCTCAAAAGGAAGGTCTCCTGAAAGCTTCTCCCAAGAAATAATCTGCT
GCTAAGGGTGCAGCTGCAACAACTGCTGCAGAGGTTCCAGCAAAAAAGATGACTGCTGTG
GGCCAGAAGGCTCCAGCCCGGAAGGTTCCTGCCAAGAAAGCTGCAGGCCAGAAGACAGCA
CCTCTGAAAGCTCAGAATGGTCAGACAGCTCCAGCCCAGAGAGCACCTGCTCCAAAGGCG
TCTGGCAAGAAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.06 |
| SRP021940_cerebellum | 0.05 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.09 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 8.54 |
Parental protein coverage
Changes in the retrocopy sequence
