RetrogeneDB ID:
retro_ecab_402
Organism:
Horse ( Equus_caballus )
Location:
17:67288131-67288638 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
63.19 %
Coverage:
75.32 %
Frameshifts:
5
Stop codons:
2
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_402
CAAACATCTATGCAACTGTTTAAGCTGGCCCACAAGTGCAGCCCAGAGATAAAGCAAGAA
AAGCAGAAGCTGTTGTCTGAGGCTAGAAGAAAGCTGCCTGCAAAGGGGACGTCCCCACTG
AGACCACCTGTGCTTTGAGCAGGTATTAATACTGCCACCACCTTGTGGAGAGTCAGAAGG
CAATTGCACACACATGGATCCCAATGAGCGAGTCCTCCTGCCTGCCTTGTGCTGTAACAT
GGGAGTTCCCTAGTTCACTATCAAGGGAAAAGCCACGCCTGGATATCTTGTCCACGGAAA
GACCAGCACCAACCATCACCTTCACACAGGTTAACTGGGAAGAAAAAGGAACTCTGACTA
AGCTGGTGGAAGCTGTCAGGACCCGTTGCAATGGCAGATATAATAAGATCCACCATCATT
GGGAGGCAACATCAGAGGTCCAAAATCCGTGGCTCTCATTGCCAAGCTGGAAATGCAAAG
GCTAAAGAACTTGCTACCAAACTTGGA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.58 |
| SRP021940_cerebellum | 0.1 |
| SRP021940_embryo | 0.24 |
| SRP021940_placental_villous | 0.09 |
| SRP021940_synovial_membrane | 0.16 |
| SRP021940_testis | 1.36 |
Parental protein coverage
Changes in the retrocopy sequence
