RetrogeneDB ID:
retro_ecab_408
Organism:
Horse ( Equus_caballus )
Location:
17:17151251-17151746 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
63.69 %
Coverage:
64.84 %
Frameshifts:
2
Stop codons:
3
Parental gene:
Parental gene symbol:
PRDX3
Parental gene aliases:
No gene alias available
Parental gene description:
peroxiredoxin 3 [Source:HGNC Symbol;Acc:9354]
Genomic region (view in browser)
>retro_ecab_408
TTGACAAACATATAGTGATCTTGTTCTGGTCAAGCAAAATTTACCTTTAGCACCAGTTCC
TCAGATCATGCTCCTGCTGTCAGCCAGTGTGGACCCTCTTTTAGTGGAATAGCTGATGTC
AATGGAGAATTCAAAGAACTAAGCTTTCATGACTTTAAGGGGAAATATTTGGTGCTTTTC
TTTTATCCTTTGGATTTCACCTTTATGTGTCCTACAGAAATTGTTGCCTTTGGTGATTAA
GCCAATGAGTTTCATGATGTGAACTGTGAAGTTGTTGTAGTTTTGGTGAGTTCTTTCTTT
GCCATCTTGACTGATAAATATACAAAGGAAGAAAGGCAGTTTGGGCCACAAGAACATTGC
AGTCTTGTCAGATCTGACTAAACAAAAATTTCCTGAGACTACAGTGTGCTGTCCCTGAGA
GGTCTTGCACTAAGAGGTCTCTTCATGACTGACCCCAGTGGAGATATGAAGCATTCGAGT
ATGAATATCCTCCCA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
