RetrogeneDB ID:
retro_ecab_413
Organism:
Horse ( Equus_caballus )
Location:
17:31838547-31839750 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
70.49 %
Coverage:
62.29 %
Frameshifts:
7
Stop codons:
10
Parental gene:
Parental gene symbol:
DDX3X
Parental gene aliases:
No gene alias available
Parental gene description:
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked [Source:HGNC Symbol;Acc:2745]
Genomic region (view in browser)

>retro_ecab_413
TTTGCTGGCTCACACCTGAAGTCTTGAAGTAATCAGAGTGGAGGAAGTACAGCCATCAAG
GGGTGTATATTTCTCCTCACTTAAGGACAGAGAAGCTACAAAAGGAGTCTACGATGAAGA
CAGTTCAGGGTGGAATTCTAATAAAGATAAGGGTACCTAGAGCAGTTCTGAGTCTCATAG
TGATTCAAGAGAAAATTCCAGCTTCTTCAGTGATTGTGGAAGTGGATCAAGGGAGAAGTT
TGATGATCGTTGGGAGAGTGACTATGATGGCATTGGCAGTCATGGTGACACAAGTGGCTT
TGGCAAATTTGAACGTGGTGGAAACAGTCACAGTGTAACAAATCAGAGTAAGATGATTGG
CCAAAACCACTCTAACCAAGTGAATGCTTGGTACAGGGACTTTTTTCAGGAAATAACACT
GGGATTAACTTTGAGAAATACAATATTCCAATTGAGGCAATAGGCAACAACTATCCCCCA
CATACTGAAAGTGTCAGTGATGTTGAGATGGGAGAAATTATCATGGGAAACATAAAGCTT
ATTTGTTATACTCACCTGACTCCAGTGCAAAAGGATGCTATGATTATTATCAAAGAGAAA
ACACGCTTGATGACTTGTACCCAAACAGGGTCTGTAAAAACTACAGCATTTCTCTTGCCC
ATCTTGAGTTAGATTTATTCAGATAGTCCAGGAGAGACTTTGAGGGCCATAAAGGGGAAT
GGAAGGTAGGGGCGCTGCAAACAATCCCTAATATCCTAGGTATTAGCACCAAAGAGAGAA
TTGGCAGTACCGATCTGTGAAGAAGCCAGAAAATTTTCCTATCAATCTAGAGTTAGTCCT
TACATTGTATATGGTGGTGCTGATATTGGTCAACAGATGTGTGACTTAGAACATGGATGT
CACTTGTTAGTAGCCACTCTAGGAGGCCTAGTAGAAATGAGGTAAAGAGGAAATATTGGA
TAAGACTTCTGAAAATACATGGTGTTGGGTAAAGCTGATCTTATATTGGATGTGAGTTTT
GAAGCTCAGATAAGTAGAAAATTTAAACAAGTAGTATGCCACCAAAGGAAGTTCTCCACA
CTATGAGGGTTTAGTGCTACTTTCTCTAAGAAAAATACAGACGCTTGCTCATGATTTCTT
GGGTGAATATATCTTTTTGGCTGTGGGAAGATTGGCTTTACCTCTGAGAACATCACATAC
AAA
Library | Expression (reads per million mapped reads) |
---|---|
SRP021940_articular_cartilage | 0.0 |
SRP021940_cerebellum | 0.0 |
SRP021940_embryo | 0.02 |
SRP021940_placental_villous | 0.0 |
SRP021940_synovial_membrane | 0.0 |
SRP021940_testis | 0.0 |
Parental protein coverage

Changes in the retrocopy sequence
