RetrogeneDB ID:
retro_ecab_427
Organism:
Horse ( Equus_caballus )
Location:
18:14406043-14407398 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
74.73 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
4
Parental gene:
Parental gene symbol:
NONO
Parental gene aliases:
No gene alias available
Parental gene description:
non-POU domain containing, octamer-binding [Source:HGNC Symbol;Acc:7871]
Genomic region (view in browser)
>retro_ecab_427
ATGCGGAGCAATAAAACCTTTAACTTGGAGAAGCAGAACCATACTCCAAGGAAGCATCAT
CAGCATCACCACCAGCAGCCACCACCGCCACGACCAATACCTGCAAATGGTCAACAAGCC
AGCAGCCAAAATGAAGGCTTGACTATTGACCTGAAGAATTTTAGGAAACCAGGAGAGATG
ACCTTCACCCAACGTATCCGGCTCTTTGTTGGCAATTTTCCTTCTGACATCACTGAGGAG
GAAATGAGGAAATTATTTGAGAAACATGGGAAGGCAGGCGAAGTCTTCATTCATAAGGAT
AAGGGCTTTGCCTTATCAGCTTGGAAACATGGGAGATTGCCAAAGTGGAGCTGGACAACA
TGCCACTCCAGGGAAAGCAGCTCTGTGTGTGCCTTGCCTGCCATAGCGGATCCCTTGCTG
TCTGAAACCTTCCTTAGTATGTATCCAACGATCTGCCAGAGGAAGCCTTTTCTGTGTCCG
TCCAGGTGGAGAGGGCTATAGTTGTTGTGGATGATCGAGGAAGGCCCTCAGGAAAAGGCA
TTGTTGAATTCTCAGGGAAGCCAGCTGCTTGGAAAGCTCTGGACAGATACAGTGAAGGCT
TCTTCCTGCTAACCACATTTCCTTGGCCTGTGACTTTAGAGCTCGTGGACCGGTTAGATG
ATGAAGAGGGACTTCCAGAGATTCTGGTTATAAAGAACAATCAATTTCACAATGAACAAG
AGCATCCACCCAGATTTGCACAGCCTGGCTCCTTTGAGTATGAGTATGCCATGCGCTGGA
ATGCACTCACTGAGGTGGAGAAGCAGCAGCAGGATCGAGTGGACCACAATATCAAGGAAG
CGCATGAGAAACTGGAGATGGAGATGCAGGCTACTTGCCATGAGCACCAGGTCATGCTAA
TGAGGCAGGATTTGATGAGGCGTCAAGAAGAACTTCAGAGGATGGAAGAGCTGCACAACC
AAGAAGTGCAAAAATGAAAGCAACTGGAGCTCAGGCAGGAGGAGGAGCACAGGTGCCGGG
AGGAAGAGATGAGGCAACAACAGGAAGGACTCAAGGGAAGCTTGCCTGACGCAAGAGAGC
AGGAGATATGACTGGACCAGTTGGCTATGGGAGGTGCTATGGGCATAAACAACAGAGACG
CCATGCCCCCTGCTCCTGTGCCTGCTGGTACTCCAGCTCCTCCAGGACCTGCCACTATGA
TGCCAAATGGAACCTTGGGATTGACCTCACCAACAACTGAAGGCTTTGGCCAACCTGCTA
CAACGGAAGGAATTGGGGCAATTGGTGGAACCCCTCCTGCATTCAACCATGCAGCTCCTG
GAGCAGAATTTGCTCCAAACAAACGTCATCGATAT
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.12 |
| SRP021940_cerebellum | 0.25 |
| SRP021940_embryo | 0.65 |
| SRP021940_placental_villous | 0.18 |
| SRP021940_synovial_membrane | 0.18 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
